Gene Detail

View functional annotation, sequence and genome location for gene Wpig01-g1234.t1.

Wpig01-g1234.t1

Species: Whitmania pigra

NCBI Taxonomy ID: 486152

Preferred name: PDZD7

Description: Domain present in PSD-95, Dlg, and ZO-1/2.

Genome Location
  • Contig: Wpig01
  • Feature: exon
  • Coordinates: 409883 - 410014 (-)
  • Source file: Whitmania_pigra.chr.ANNEVO.gff3.gz

The bar shows the gene locus on the contig. It is an approximate visualization based on available GFF data.

Sequences
Protein Sequence
Whitmania_pigra.chr.ANNEVO.pep.fasta.gz (protein)
MKSGNNSGEIQRPFLQPAEPLTPVTTVSVEREGALEKQFIINFDRRCTILLSEEERDALYSSLGDYRATRQLNPLLDRLSQILNSPIKMELVDDIKHFVEARHLVQFEKGMPFGDLGSKVVKILNSTPSYDVRQRSATTTPVSLTPHPMGDWDRRTSKDETGESKRFELTKVDKQQLGFTLWGAPDGQGGIFIKHIIPQSIADSSGLKPGDRLLDINDTPLESFSLAQVANLIENSGVLRMHIQRNRASQRLYATPKNLLLREERTRGEGRTAFPPKFDPRDKRAPTPIVTVSSPSVYTSKAFPEVDKGSTLKEGMFGRRIYDLDPPRSHTGTMSSVVSKIRQIPIITSVHRPPNSDGLDNVTLEKYESLSSFPHRRTKTVIDLNSKAVENDSSIRIEEMANVEDNDDTAARQRTPIPLPRSLSSTLPRLAQSTPFTVQHHKSTSFQMLPNPHTYNYQSSTLSSPILGRSTKVIPIIRSYIPQDDIDKKSATPSQKYALNRPQNQQQQQQNDIREIQIEQPQLNLIPPQYEQLFQQIRPPRMQDAELYSSVQQFPPHPHPRSRSHHSNENIVRHDERYSSKPQYVHHRKDAKRSLSNTPVPPERYPDPVFPTVIPHYHAIPRRAENHPYLESDFPHPGMWKSMDDIPYGSVNKKLSPKRHRSQRYLSNPDLSSWGRYGRVYHERGSPTPSDLDEYPERSRNGRYERPFPSGWRSDRDVEYGTTRHYRRGNKRWNHPDRRREYFDAAHAQFYEDRRLRSLREPEWLDRWYDTGSEYSDFETVSTAFDSSIERQANRKYKDRPSRWQNNYGQYFQRPNVYLSNASQEVLFRTNPNPSTDSDKFRVPIRIDDITSSYLDDESEISPRSRRSKYDRILDNGNRNVKSSPRKPARNLTGKSSNAFDREAKATYVKSKEAEKLRASKSISKSPRAQPRYHSKTPSMSSHSSNYSQIASTEMPFFNSISAPNDEPKKANEEEKSPRTNQRRSEKSHINELSEDEMNAISLLGYSKLSSPGASLRLKSSSAAQNHVYQNIHFNREEPTTPRQIDDRLPSSPLIRSDSQSSVTSIRTTKSGHYDFVDATTEFNKSQSQSKNLAYTENESTIRTSNEVKSSRERIFGKGWQAAQIGPVPETVAKSESSPYSKMKQDDSWIKNGDDDDAIKPAEKPETYPAVDSKTNKDDPKADETNSSKWSLKDDNKPEKGWSENVLNDGRYKSIAIDSADSGVSVETNVLSSPLKSPTNPPALYPKPFVANQSYAIYQNQNFLSRTSGESTDSKKFHLNQSNSPQISGGKVNANTSGNAPKRHSELKWRPMAKQRTFDERQKSLVAAENNKRLHNRIQAKLDKTCPYLGLSISGGMESRTCPDIIIDNITRGSAADIEGSLKPGMKLTSVDGQSLVNVTHGEAVRIIKASFLDKTKRWMDVEAVN
Functional Annotation
Preferred name PDZD7
Description Domain present in PSD-95, Dlg, and ZO-1/2.
Seed ortholog 7668.SPU_021200-tr
E-value 1.3e-10
Score 75.5
EggNOG OGs KOG3528@1|root,KOG3528@2759|Eukaryota,38CIV@33154|Opisthokonta,3BI1Q@33208|Metazoa,3CRST@33213|Bilateria
Max annotation level 2759|Eukaryota
COG category T
GOs
EC number -
KEGG KO K21879, K21882
KEGG pathway -
KEGG module -
KEGG reaction -
KEGG RClass -
BRITE ko00000, ko03036
KEGG TC -
CAZy -
BiGG reaction -
PFAMs PDZ
InterProScan Annotation
No InterProScan annotation rows were found for this gene.
Genome Browser