Gene Detail

View functional annotation, sequence and genome location for gene PE_Scaf2264_0.3.

PE_Scaf2264_0.3

Species: Paraescarpia echinospica

NCBI Taxonomy ID: 2080241

Preferred name: ELP2

Description: endopeptidase activator activity

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Genome Location
  • Contig: Superscaffold1
  • Feature: gene
  • Coordinates: 44037971 - 44047340 (-)
  • Source file: Paraescarpia_echinospica.chr.gff3.gz

The bar shows the gene locus on the contig. It is an approximate visualization based on available GFF data.

Sequences
Protein Sequence
Paraescarpia_echinospica.chr.pep.fasta.gz (protein)
MSTGVVCLWDIFLDVQIENTMRTCNSFSPDSGDLLLASCAQDCYIRVWRISRRHLVEGAALTERSIDDLLQGEEIKLKETIFSFLQKGKPINYAVTLESVMQGHENWIYSIRWEPEIIRDGEHHQPMCLLSASMDKTVILWKPDPEMGVWIENVRVGDVGGNSLGFYGGVFSPDGQSILAYGYQGAFQMWRQQKDIGLCVPVVTSGGHFGPVQDLVWQPDTGQFVLTVSADQTARLHSYWTAEDDRQSGWHEIARPQIHGYDLQCIAMINKFSFACGADEKVVRVFKAPVNFIDNFRRLCSIDTEKDLCDRQYYEGLPEGASVPALGLSNKAIYLEQVSTQNKELYGAGDLRPQSNPQYSEAYFAPLQLTEPLTEGDLLQNTL*
CDS Sequence
Paraescarpia_echinospica.chr.CDS.fasta.gz (nucleotide)
ATGTCCACTGGCGTGGTGTGTCTATGGGACATTTTCCTAGATGTACAGATAGAGAACACCATGCGCACTTGTAATAGTTTCTCCCCAGACAGCGGTGACCTACTTCTGGCGAGCTGTGCACAGGACTGCTACATCCGTGTGTGGAGGATTTCACGGCGCCACCTGGTGGAAGGTGCTGCATTGACAGAACGAAGCATTGACGACCTACTGCAGGGAGAGGAAATAAAACTGAAGGAAACCATCTTCTCTTTTCTGCAAAAAGGTAAACCGATCAACTATGCAGTGACCTTGGAATCAGTGATGCAAGGTCATGAAAATTGGATTTATAGCATCCGATGGGAACCTGAGATAATCAGAGATGGAGAGCACCACCAACCAATGTGTTTGTTATCAGCATCGATGGACAAGACTGTGATCCTTTGGAAACCAGACCCAGAAATGGGAGTTTGGATCGAAAATGTTCGTGTGGGTGATGTTGGGGGAAATTCCCTGGGATTCTATGGAGGGGTCTTCAGCCCCGATGGACAGAGCATCTTGGCATATGGATACCAGGGGGCGTTCCAGATGTGGAGACAACAAAAGGACATCGGTTTGTGTGTGCCAGTGGTGACATCTGGTGGCCACTTTGGCCCCGTGCAGGACTTGGTGTGGCAGCCAGACACTGGGCAGTTTGTGCTGACGGTCAGCGCTGACCAGACTGCAAGGCTACACAGCTACTGGACAGCAGAAGATGACCGTCAGAGCGGATGGCATGAGATAGCTCGACCTCAGATCCATGGCTATGACTTGCAGTGCATCGCCATGATTAACAAGTTCTCATTTGCGTGCGGAGCTGATGAGAAAGTGGTGCGTGTCTTCAAGGCGCCGGTCAACTTCATAGACAACTTCCGTCGGCTCTGCAGCATTGACACCGAGAAAGACTTGTGTGACAGACAGTACTACGAGGGGCTGCCGGAGGGCGCCAGTGTGCCAGCTCTTGGTCTGTCGAACAAGGCAATCTACCTGGAGCAAGTATCTACCCAGAACAAGGAGCTGTATGGGGCAGGTGACCTTCGACCTCAGTCGAACCCGCAGTATTCGGAGGCCTACTTTGCTCCGCTCCAGCTTACAGAGCCCCTGACAGAGGGTGACTTGCTTCAGAACACCCTCTGA
Functional Annotation
Preferred name ELP2
Description endopeptidase activator activity
Seed ortholog 7897.ENSLACP00000016953
E-value 7.6e-115
Score 362.0
EggNOG OGs KOG1063@1|root,KOG1063@2759|Eukaryota,38R6F@33154|Opisthokonta,3B9PE@33208|Metazoa,3CUTT@33213|Bilateria,483P5@7711|Chordata,490PY@7742|Vertebrata
Max annotation level 2759|Eukaryota
COG category BK
GOs
GO:0000123, GO:0000502, GO:0000775, GO:0000776, GO:0001101, GO:0002097, GO:0002098, GO:0003674, GO:0005488, GO:0005515, GO:0005575, GO:0005622
GO:0000123, GO:0000502, GO:0000775, GO:0000776, GO:0001101, GO:0002097, GO:0002098, GO:0003674, GO:0005488, GO:0005515, GO:0005575, GO:0005622, GO:0005623, GO:0005634, GO:0005654, GO:0005694, GO:0005737, GO:0005813, GO:0005815, GO:0005829, GO:0005856, GO:0005874, GO:0005875, GO:0005938, GO:0006139, GO:0006351, GO:0006354, GO:0006355, GO:0006357, GO:0006366, GO:0006368, GO:0006396, GO:0006399, GO:0006400, GO:0006464, GO:0006725, GO:0006807, GO:0006950, GO:0006979, GO:0008017, GO:0008023, GO:0008033, GO:0008047, GO:0008092, GO:0008150, GO:0008152, GO:0008284, GO:0009058, GO:0009059, GO:0009451, GO:0009719, GO:0009725, GO:0009737, GO:0009889, GO:0009892, GO:0009893, GO:0009966, GO:0009987, GO:0010033, GO:0010467, GO:0010468, GO:0010556, GO:0010604, GO:0010646, GO:0010950, GO:0010952, GO:0015630, GO:0015631, GO:0016043, GO:0016070, GO:0016504, GO:0018130, GO:0019219, GO:0019222, GO:0019438, GO:0019538, GO:0019899, GO:0019900, GO:0019901, GO:0022607, GO:0023051, GO:0030162, GO:0030234, GO:0031248, GO:0031323, GO:0031325, GO:0031326, GO:0031347, GO:0031349, GO:0031537, GO:0031538, GO:0031974, GO:0031981, GO:0032268, GO:0032270, GO:0032446, GO:0032447, GO:0032774, GO:0032991, GO:0033588, GO:0033993, GO:0034470, GO:0034622, GO:0034641, GO:0034645, GO:0034654, GO:0034660, GO:0036211, GO:0042127, GO:0042221, GO:0043085, GO:0043170, GO:0043226, GO:0043227, GO:0043228, GO:0043229, GO:0043231, GO:0043232, GO:0043233, GO:0043248, GO:0043412, GO:0043933, GO:0044085, GO:0044093, GO:0044237, GO:0044238, GO:0044249, GO:0044260, GO:0044267, GO:0044271, GO:0044422, GO:0044424, GO:0044427, GO:0044428, GO:0044430, GO:0044444, GO:0044446, GO:0044451, GO:0044464, GO:0044877, GO:0045862, GO:0046425, GO:0046483, GO:0048518, GO:0048519, GO:0048522, GO:0048583, GO:0048584, GO:0048831, GO:0050789, GO:0050790, GO:0050793, GO:0050794, GO:0050896, GO:0051171, GO:0051173, GO:0051239, GO:0051246, GO:0051247, GO:0051252, GO:0051336, GO:0051345, GO:0052547, GO:0052548, GO:0060255, GO:0061133, GO:0061134, GO:0061135, GO:0065003, GO:0065007, GO:0065009, GO:0070013, GO:0070647, GO:0070840, GO:0071704, GO:0071840, GO:0071944, GO:0080090, GO:0080134, GO:0090304, GO:0097305, GO:0097659, GO:0098687, GO:0098772, GO:0099080, GO:0099081, GO:0099512, GO:0099513, GO:0099568, GO:1901360, GO:1901362, GO:1901564, GO:1901576, GO:1901700, GO:1902493, GO:1902494, GO:1902531, GO:1903506, GO:1904892, GO:1905368, GO:1905369, GO:1990234, GO:2000024, GO:2000026, GO:2000112, GO:2001141
EC number 2.1.1.43
KEGG KO K11374, K11422, K12882, K18178
KEGG pathway MAP00310, MAP03013, MAP03015, MAP03040, MAP04714
KEGG module M00399
KEGG reaction R03875, R03938, R04866, R04867
KEGG RClass RC00003, RC00060, RC00181, RC00496
BRITE ko00000, ko00001, ko00002, ko01000, ko03016, ko03019, ko03029, ko03036, ko03041
KEGG TC -
CAZy -
BiGG reaction -
PFAMs WD40
InterProScan Annotation
Protein ID MD5 Length Analysis Signature Accession Signature Description Start End Score Status Date IPR Accession IPR Description GO Pathway
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 Gene3D G3DSA:2.130.10.10 - 2 150 5.9E-14 T 03-02-2026 IPR015943 WD40/YVTN repeat-like-containing domain superfamily - -
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 SMART SM00320 WD40_4 94 142 3.3E-4 T 03-02-2026 IPR001680 WD40 repeat - -
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 SMART SM00320 WD40_4 198 238 0.03 T 03-02-2026 IPR001680 WD40 repeat - -
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 SMART SM00320 WD40_4 14 49 1.5 T 03-02-2026 IPR001680 WD40 repeat - -
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 FunFam G3DSA:2.130.10.10:FF:000575 Elongator acetyltransferase complex subunit 2 79 197 8.8E-49 T 03-02-2026 - - - -
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 SUPERFAMILY SSF50978 WD40 repeat-like 4 304 2.85E-23 T 03-02-2026 IPR036322 WD40-repeat-containing domain superfamily - -
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 PANTHER PTHR44111 ELONGATOR COMPLEX PROTEIN 2 27 383 8.4E-120 T 03-02-2026 IPR037289 Elongator complex protein 2 - -
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 Pfam PF00400 WD domain, G-beta repeat 201 237 510.0 T 03-02-2026 IPR001680 WD40 repeat - -
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 Pfam PF00400 WD domain, G-beta repeat 26 48 460.0 T 03-02-2026 IPR001680 WD40 repeat - -
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 Pfam PF00400 WD domain, G-beta repeat 99 141 5.8 T 03-02-2026 IPR001680 WD40 repeat - -
PE_Scaf2264_0.3 389a300ac6260006198316c0daba8b09 383 Gene3D G3DSA:2.130.10.10 - 167 346 2.8E-15 T 03-02-2026 IPR015943 WD40/YVTN repeat-like-containing domain superfamily - -
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