Gene Detail

View functional annotation, sequence and genome location for gene PE_Scaf3091_5.12.

PE_Scaf3091_5.12

Species: Paraescarpia echinospica

NCBI Taxonomy ID: 2080241

Preferred name: -

Description: CD20-like family

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Genome Location
  • Contig: Superscaffold1
  • Feature: gene
  • Coordinates: 54908655 - 54925638 (-)
  • Source file: Paraescarpia_echinospica.chr.gff3.gz

The bar shows the gene locus on the contig. It is an approximate visualization based on available GFF data.

Sequences
Protein Sequence
Paraescarpia_echinospica.chr.pep.fasta.gz (protein)
MQTTTVLPRGGQSVPADPMQNLVFVPQYVASQPGSPMIWKNYASKTSSILGYTQIVIGFLCILFNGLSIGTNSSSGAVIGHGIWGGGFFILTGAFGVVAGKKRTTCPIITFMVLSILAAALFATLLLSLASICIAVNQDPYSYLHLSHRRSIAIAMDSVLVALSLIEAVAAIWSSAICCASVCCGRRAQSGIMMQQVIVGASGVQPLFPAGSDYPQTGNMFQQQAMATAIGLQQFNVAPTSQIPQSTINYPPQYTVTAAPPAYAETAPQGAAGAAETSAPMSQLVDEEKKIAV*
CDS Sequence
Paraescarpia_echinospica.chr.CDS.fasta.gz (nucleotide)
ATGCAGACGACGACAGTTCTTCCCCGTGGCGGCCAGTCTGTCCCAGCTGATCCTATGCAGAACTTAGTGTTTGTGCCGCAGTATGTAGCGTCTCAACCTGGATCTCCGATGATCTGGAAAAACTACGCCAGCAAGACGTCGTCGATACTAGGATACACACAGATAGTGATTGGCTTTCTCTGCATATTGTTCAATGGGCTGTCGATTGGTACGAATTCTTCCTCGGGAGCCGTCATTGGTCATGGCATCTGGGGTGGAGGGTTTTTTATACTGACTGGAGCGTTTGGCGTGGTGGCTGGCAAAAAACGAACCACGTGCCCAATTATTACCTTCATGGTACTTTCGATACTGGCTGCGGCTCTATTTGCGACCCTCCTGTTGAGCCTTGCGTCCATTTGCATTGCCGTCAACCAAGACCCGTACTCGTATCTACACCTAAGTCACAGACGGAGCATTGCAATAGCTATGGACTCCGTCTTGGTGGCTCTGTCTCTGATTGAGGCTGTTGCAGCGATCTGGTCGTCAGCTATCTGCTGTGCTTCCGTCTGCTGTGGACGCCGCGCGCAGTCTGGCATCATGATGCAGCAAGTGATTGTGGGAGCTAGTGGCGTACAACCCTTGTTCCCCGCCGGAAGCGACTATCCTCAAACAGGCAATATGTTCCAGCAGCAAGCTATGGCCACCGCCATCGGCCTGCAGCAGTTCAATGTAGCTCCTACAAGCCAGATTCCTCAGTCGACAATAAACTACCCTCCGCAGTACACCGTCACTGCCGCTCCGCCGGCATATGCAGAAACTGCGCCCCAGGGAGCAGCTGGTGCTGCCGAGACATCTGCTCCAATGTCACAACTCGTTGACGAAGAAAAGAAGATTGCTGTTTAA
Functional Annotation
Preferred name -
Description CD20-like family
Seed ortholog 10224.XP_002734635.1
E-value 1.7e-16
Score 86.3
EggNOG OGs 2D961@1|root,2TD2R@2759|Eukaryota,3AQIG@33154|Opisthokonta
Max annotation level 2759|Eukaryota
COG category S
GOs -
EC number -
KEGG KO K22190
KEGG pathway -
KEGG module -
KEGG reaction -
KEGG RClass -
BRITE ko00000, ko02000
KEGG TC 1.A.37.2
CAZy -
BiGG reaction -
PFAMs CD20
InterProScan Annotation
Protein ID MD5 Length Analysis Signature Accession Signature Description Start End Score Status Date IPR Accession IPR Description GO Pathway
PE_Scaf3091_5.12 681d9205b6393ff1ed9bee76dea45066 293 MobiDBLite mobidb-lite consensus disorder prediction 267 293 - T 03-02-2026 - - - -
PE_Scaf3091_5.12 681d9205b6393ff1ed9bee76dea45066 293 MobiDBLite mobidb-lite consensus disorder prediction 267 279 - T 03-02-2026 - - - -
PE_Scaf3091_5.12 681d9205b6393ff1ed9bee76dea45066 293 PANTHER PTHR23320 MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED 31 241 8.7E-20 T 03-02-2026 IPR030417 Membrane-spanning 4-domains subfamily A - -
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