Gene Detail

View functional annotation, sequence and genome location for gene PE_Scaf7129_0.2.

PE_Scaf7129_0.2

Species: Paraescarpia echinospica

NCBI Taxonomy ID: 2080241

Preferred name: TMEM246

Description: -

Genome Location
  • Contig: Superscaffold1
  • Feature: gene
  • Coordinates: 19806847 - 19818606 (+)
  • Source file: Paraescarpia_echinospica.chr.gff3.gz

The bar shows the gene locus on the contig. It is an approximate visualization based on available GFF data.

Sequences
Protein Sequence
Paraescarpia_echinospica.chr.pep.fasta.gz (protein)
MMECRLTMKRLLVKLDRQKAKYYKLCTRRNLRELVWKWKKMAMLYAATFLFVLPLLCRNLNNSIYSFHSKAATDSARQMARVLNDERVRVAERFLSKPSVASPRRGATNAVWSPNEDIQDVDVAVTIVTVSREGNVTGGYKPRYLTQAVWRFISLLQKQDISYSVVLSICNVDRNPNAYDEAIHLANIVRTFTRHSSAQTPSNETLEKEKDDYVYCLQTTIALRRPRYVLLVEDDALPNDHMTTVLGHVLRTRLNWKYARGDFWNSDDDIAYVKFYHPDWLLGYGSFDPNRLSCLLAIGAVASSLVLAVVRCISSRLVRERDLYVTWALLAIYAMLVAISVGRSNIMHWMRLFPPYLYSTATAPSCCTQAVLFPAISALRVADYLAGVKCKADFGKDTALEQFVRVNGMRSYFVEPNTFSHVGMYSTLSKDVLDPGIVDVS*
CDS Sequence
Paraescarpia_echinospica.chr.CDS.fasta.gz (nucleotide)
ATGATGGAATGTCGCTTGACAATGAAGAGACTACTAGTTAAACTTGATCGTCAGAAGGCGAAGTACTACAAGCTGTGTACGAGACGCAATTTGCGAGAACTGGTATGGAAGTGGAAGAAGATGGCGATGCTGTATGCAGCAACCTTCCTCTTCGTCCTGCCGTTGCTGTGTCGTAACCTCAACAACTCTATCTACTCGTTCCACTCCAAAGCCGCCACAGACTCGGCCCGCCAGATGGCGCGCGTCCTCAACGATGAGCGCGTGCGCGTCGCCGAGCGTTTCCTGTCGAAGCCAAGCGTTGCGTCACCGCGCCGCGGTGCTACAAACGCTGTGTGGTCGCCAAATGAAGACATTCAAGACGTCGACGTTGCTGTTACCATAGTGACGGTGTCGCGTGAGGGTAACGTGACAGGCGGATACAAACCCCGTTACCTTACGCAGGCTGTCTGGCGGTTCATATCGTTACTGCAGAAGCAGGACATTTCTTACTCCGTCGTGTTATCCATCTGTAACGTTGACCGCAACCCAAACGCATACGATGAGGCGATCCACCTGGCGAACATCGTGCGAACATTCACGCGCCACAGCTCCGCCCAGACACCCTCCAACGAGACGCTGGAGAAAGAGAAAGACGATTACGTGTACTGCCTGCAAACAACGATCGCCTTGCGTCGTCCCCGCTACGTCTTATTGGTCGAGGATGACGCCCTCCCAAACGATCACATGACAACCGTACTTGGTCACGTGTTGCGAACGCGTCTAAACTGGAAGTACGCACGCGGTGACTTCTGGAACAGTGACGATGATATTGCCTATGTCAAGTTCTATCACCCGGACTGGCTGCTCGGCTACGGTAGCTTTGACCCGAACCGCCTGTCGTGTCTACTGGCGATTGGCGCCGTCGCTTCGTCTCTGGTCCTAGCGGTCGTGCGGTGCATCTCGTCGAGACTCGTTCGGGAACGAGATTTGTACGTGACGTGGGCGCTACTTGCTATTTACGCCATGCTTGTGGCCATTTCAGTAGGCCGCAGCAACATCATGCACTGGATGCGGCTGTTTCCACCATATCTTTACAGTACGGCGACTGCCCCTAGCTGCTGCACGCAAGCCGTACTTTTCCCGGCAATCAGCGCGCTCCGGGTCGCTGACTACTTGGCCGGAGTAAAGTGCAAGGCAGACTTCGGCAAAGACACGGCGCTCGAACAGTTCGTGCGTGTCAACGGGATGCGATCCTACTTCGTTGAACCGAACACCTTTTCGCACGTTGGCATGTACTCGACTTTGTCGAAAGACGTTCTTGATCCGGGAATCGTCGATGTCAGCTGA
Functional Annotation
Preferred name TMEM246
Description -
Seed ortholog 45351.EDO49277
E-value 1.9e-67
Score 227.0
EggNOG OGs 2CM3H@1|root,2QT3K@2759|Eukaryota,38DAA@33154|Opisthokonta,3BI2Z@33208|Metazoa
Max annotation level 2759|Eukaryota
COG category -
GOs -
EC number -
KEGG KO -
KEGG pathway -
KEGG module -
KEGG reaction -
KEGG RClass -
BRITE -
KEGG TC -
CAZy -
BiGG reaction -
PFAMs -
InterProScan Annotation
Protein ID MD5 Length Analysis Signature Accession Signature Description Start End Score Status Date IPR Accession IPR Description GO Pathway
PE_Scaf7129_0.2 58f56889b8fd6b20cda0bf406e2716e9 441 PANTHER PTHR31410 TRANSMEMBRANE PROTEIN 246 38 431 1.8E-91 T 03-02-2026 IPR029675 GPI-GalNAc transferase PGAP4 - -
PE_Scaf7129_0.2 58f56889b8fd6b20cda0bf406e2716e9 441 CDD cd22190 PGAP4 38 430 7.06901E-133 T 03-02-2026 - - - -
Genome Browser