Gene Detail

View functional annotation, sequence and genome location for gene PE_Scaf7222_6.2.

PE_Scaf7222_6.2

Species: Paraescarpia echinospica

NCBI Taxonomy ID: 2080241

Preferred name: CPNE8

Description: Copine VIII

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Genome Location
  • Contig: Superscaffold1
  • Feature: gene
  • Coordinates: 14478551 - 14496721 (-)
  • Source file: Paraescarpia_echinospica.chr.gff3.gz

The bar shows the gene locus on the contig. It is an approximate visualization based on available GFF data.

Sequences
Protein Sequence
Paraescarpia_echinospica.chr.pep.fasta.gz (protein)
MEYYFEEQQKLKFEVVDIDCKSTDLRRHDYLGNAEFTLVEIVSSYGPVTKQLKDCTQTKTATILVSAEELSFCKEEVTLQFCGKNLDKKDTIGSSDPFLLFYRTNEDHTDTVVHKTEVIKNNLNPTWRDFTIPVRALCNGDYKRSLKVECYDWDRDGSHDLIGEFSTTVEELSAGQGPSNVYQCINRKKEKKKKDYKDSGTIKLLTFKVNKFDSYLDYIKGGTKIHCTIAVDFTKSNGDVTSPSSLHYIQGSQPSMYEHALRAVGEVIQEYSSDDKQFQALGFGAKVPPDGRLSHEFFMNGHPMNPYCRGIDGVVDAYFNTLHTVQMDGPTHFAPIIRHVAEEARNGDNGKNYYILLIFTDDIVSDMPQTVEAIVRASTLPLSIIIVGIGKADFTGGNTFLFPIVYHITSVLFMKMFPDRMLYTVTDDKQHTVMAECINAPKINKFSAF*
CDS Sequence
Paraescarpia_echinospica.chr.CDS.fasta.gz (nucleotide)
ATGGAATATTACTTTGAAGAGCAACAGAAACTGAAGTTTGAAGTAGTTGACATAGACTGCAAGTCAACGGACCTGCGTAGACATGATTACTTAGGGAATGCCGAGTTCACATTGGTTGAGATTGTCAGCTCGTATGGACCAGTCACAAAGCAACTCAAAGACTGCACGCAAACCAAAACCGCAACAATCTTGGTGTCAGCAGAAGAGCTCTCCTTTTGCAAGGAAGAAGTTACGCTACAATTCTGTGGCAAAAACCTTGATAAGAAGGACACCATCGGCTCATCGGATCCATTCCTGTTGTTCTATCGCACAAACGAAGACCATACTGACACAGTGGTACATAAAACAGAAGTGATCAAGAACAATTTGAATCCAACATGGAGGGATTTCACCATTCCAGTGCGTGCATTATGTAATGGAGATTATAAGAGATCACTGAAAGTGGAATGTTATGATTGGGACAGAGATGGCAGCCACGATCTGATTGGTGAGTTTTCAACAACGGTGGAGGAACTGAGTGCTGGCCAAGGACCTAGCAATGTCTACCAGTGTATCAACAGAAAGAAGGAGAAGAAAAAGAAAGACTACAAGGATTCTGGCACGATTAAGTTGTTGACCTTCAAGGTGAACAAATTTGACTCTTACCTGGATTACATCAAGGGCGGAACTAAAATTCACTGCACAATTGCCGTGGACTTCACAAAGTCAAATGGTGATGTGACGTCGCCATCCTCACTGCATTACATACAAGGCAGTCAGCCCAGTATGTACGAGCATGCATTGAGAGCGGTCGGGGAAGTCATCCAGGAGTATAGCAGTGATGACAAACAATTCCAAGCGTTGGGCTTTGGCGCTAAGGTTCCGCCAGATGGCAGATTGTCACATGAGTTCTTCATGAATGGTCATCCCATGAACCCGTATTGCCGTGGCATCGACGGGGTGGTTGATGCATACTTCAACACCCTCCACACTGTGCAGATGGATGGCCCCACCCATTTCGCCCCCATCATCAGACACGTTGCAGAGGAAGCCCGGAATGGGGACAATGGTAAGAATTACTACATCCTGCTAATATTCACGGATGACATTGTCAGTGACATGCCCCAGACAGTAGAAGCCATCGTTCGGGCCTCCACTCTCCCTCTCTCAATCATCATTGTTGGCATCGGAAAGGCTGACTTTACAGGTGGGAATACGTTTCTCTTCCCTATCGTATATCATATCACTTCCGTTCTTTTCATGAAAATGTTTCCTGACAGAATGTTGTATACTGTCACTGATGATAAACAACATACCGTAATGGCCGAATGTATTAATGCACCTAAAATAAATAAATTCTCAGCTTTCTAA
Functional Annotation
Preferred name CPNE8
Description Copine VIII
Seed ortholog 7918.ENSLOCP00000019818
E-value 2.0e-164
Score 482.0
EggNOG OGs KOG1327@1|root,KOG1327@2759|Eukaryota,38BYU@33154|Opisthokonta,3B953@33208|Metazoa,3CSWC@33213|Bilateria,485H3@7711|Chordata,48VXQ@7742|Vertebrata,49VJ3@7898|Actinopterygii
Max annotation level 2759|Eukaryota
COG category T
GOs GO:0005575, GO:0005623, GO:0005886, GO:0008150, GO:0016020, GO:0031503, GO:0044464, GO:0051179, GO:0051641, GO:0051668, GO:0071944, GO:0097120
EC number 2.3.2.27
KEGG KO K16280
KEGG pathway -
KEGG module -
KEGG reaction -
KEGG RClass -
BRITE ko00000, ko01000, ko04121
KEGG TC -
CAZy -
BiGG reaction -
PFAMs C2,Copine,zf-C3HC4_3
InterProScan Annotation
Protein ID MD5 Length Analysis Signature Accession Signature Description Start End Score Status Date IPR Accession IPR Description GO Pathway
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 SUPERFAMILY SSF49562 C2 domain (Calcium/lipid-binding domain, CaLB) 81 193 1.87E-22 T 03-02-2026 IPR035892 C2 domain superfamily - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 SMART SM00327 VWA_4 224 413 2.5E-7 T 03-02-2026 IPR002035 von Willebrand factor, type A - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 SUPERFAMILY SSF53300 vWA-like 227 395 1.47E-12 T 03-02-2026 IPR036465 von Willebrand factor A-like domain superfamily - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 Gene3D G3DSA:2.60.40.150 C2 domain 77 206 4.7E-23 T 03-02-2026 IPR035892 C2 domain superfamily - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 Pfam PF00168 C2 domain 5 43 2000.0 T 03-02-2026 IPR000008 C2 domain - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 Pfam PF00168 C2 domain 82 183 1.7E-13 T 03-02-2026 IPR000008 C2 domain - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 PANTHER PTHR10857 COPINE 1 395 2.8E-161 T 03-02-2026 IPR045052 Copine - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 ProSiteProfiles PS50004 C2 domain profile. 59 182 15.71246 T 03-02-2026 IPR000008 C2 domain - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 CDD cd04047 C2B_Copine 75 186 1.19578E-57 T 03-02-2026 IPR037768 Copine, C2B domain - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 FunFam G3DSA:2.60.40.150:FF:000013 copine-9 isoform X1 77 206 7.5E-61 T 03-02-2026 - - - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 SMART SM00239 C2_3c 59 181 3.8E-11 T 03-02-2026 IPR000008 C2 domain - -
PE_Scaf7222_6.2 d8306b6c45c7cc1b3fb1e36521399a36 449 Pfam PF07002 Copine 245 395 1.6E-51 T 03-02-2026 IPR010734 Copine, C-terminal - -
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