Gene Detail

View functional annotation, sequence and genome location for gene PE_Scaf7345_2.11.

PE_Scaf7345_2.11

Species: Paraescarpia echinospica

NCBI Taxonomy ID: 2080241

Preferred name: CHL1

Description: Immunoglobulin C-2 Type

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Genome Location
  • Contig: Superscaffold1
  • Feature: gene
  • Coordinates: 19361710 - 19382648 (+)
  • Source file: Paraescarpia_echinospica.chr.gff3.gz

The bar shows the gene locus on the contig. It is an approximate visualization based on available GFF data.

Sequences
Protein Sequence
Paraescarpia_echinospica.chr.pep.fasta.gz (protein)
MVHHSRNMYLIVADSNDDEPWEQTRLETEHNWANITNLTPGGRYEIRVVAVNGGGETRRSTPKIVTIGPSDVTTLKSSEFYITLAGANDTATSVYIDDDTMYMKEPVVQSIATAGWFVGMMCAIVFLLIILLIICVIKRNRGGKYPVHEKEKLRGRDPDKEDEEGGFGEYTRTPYKELPRDEPEYKKSQGSIESEDKPLESESNSLAEYEDTDPMKFNEDGSFIGMYGGKNHRPEEKPLMQNDSTQPSALSTFV*
CDS Sequence
Paraescarpia_echinospica.chr.CDS.fasta.gz (nucleotide)
ATGGTACATCATTCACGCAATATGTATCTGATTGTTGCAGATTCGAATGACGATGAACCTTGGGAACAAACCCGCCTTGAGACGGAACACAACTGGGCGAACATCACCAACCTGACCCCTGGTGGGCGCTATGAGATCCGGGTGGTCGCGGTGAACGGGGGCGGTGAGACAAGGAGATCAACACCAAAGATCGTCACGATCGGACCGAGCGACGTGACGACACTTAAGTCCTCTGAGTTCTATATCACGTTGGCTGGTGCTAATGATACAGCGACAAGTGTGTATATTGATGACGACACTATGTATATGAAAGAGCCAGTGGTGCAGAGCATTGCGACGGCGGGCTGGTTCGTCGGCATGATGTGTGCCATCGTCTTCCTCCTCATCATCCTGCTTATCATCTGCGTCATCAAGAGGAATCGCGGAGGAAAGTACCCGGTGCACGAGAAGGAGAAGCTGAGAGGTCGTGACCCAGACAAGGAGGACGAAGAGGGTGGTTTTGGGGAGTACACGCGCACGCCGTACAAGGAGTTGCCGAGAGACGAGCCGGAGTACAAGAAGAGTCAGGGCTCAATTGAGAGCGAGGACAAACCACTGGAGAGCGAGTCGAACAGCCTCGCCGAGTACGAGGACACGGACCCGATGAAGTTCAACGAAGACGGCTCGTTCATCGGCATGTACGGCGGAAAGAACCACCGTCCCGAGGAGAAACCGCTGATGCAGAACGACTCCACTCAACCATCCGCCCTCTCCACCTTTGTATAA
Functional Annotation
Preferred name CHL1
Description Immunoglobulin C-2 Type
Seed ortholog 126957.SMAR011795-PA
E-value 1.0e-34
Score 139.0
EggNOG OGs KOG3513@1|root,KOG3513@2759|Eukaryota,38C7V@33154|Opisthokonta,3B984@33208|Metazoa,3CS11@33213|Bilateria,41UYB@6656|Arthropoda
Max annotation level 2759|Eukaryota
COG category T
GOs
GO:0000003, GO:0000132, GO:0000226, GO:0000278, GO:0000902, GO:0000904, GO:0001101, GO:0001501, GO:0001508, GO:0001525, GO:0001558, GO:0001568
GO:0000003, GO:0000132, GO:0000226, GO:0000278, GO:0000902, GO:0000904, GO:0001101, GO:0001501, GO:0001508, GO:0001525, GO:0001558, GO:0001568, GO:0001667, GO:0001764, GO:0001775, GO:0001871, GO:0001932, GO:0001944, GO:0002009, GO:0002020, GO:0002064, GO:0002165, GO:0002175, GO:0002252, GO:0002263, GO:0002274, GO:0002275, GO:0002283, GO:0002366, GO:0002376, GO:0002443, GO:0002444, GO:0002446, GO:0003007, GO:0003008, GO:0003381, GO:0003382, GO:0003383, GO:0003384, GO:0003674, GO:0004888, GO:0005102, GO:0005178, GO:0005488, GO:0005509, GO:0005515, GO:0005575, GO:0005622, GO:0005623, GO:0005737, GO:0005768, GO:0005886, GO:0005887, GO:0005902, GO:0005911, GO:0005912, GO:0005913, GO:0005918, GO:0005919, GO:0006582, GO:0006725, GO:0006810, GO:0006887, GO:0006928, GO:0006935, GO:0006950, GO:0006952, GO:0006955, GO:0006996, GO:0007010, GO:0007017, GO:0007043, GO:0007049, GO:0007154, GO:0007155, GO:0007156, GO:0007157, GO:0007158, GO:0007159, GO:0007160, GO:0007163, GO:0007165, GO:0007166, GO:0007167, GO:0007169, GO:0007173, GO:0007272, GO:0007275, GO:0007369, GO:0007399, GO:0007409, GO:0007411, GO:0007413, GO:0007416, GO:0007417, GO:0007420, GO:0007422, GO:0007424, GO:0007444, GO:0007507, GO:0007552, GO:0007560, GO:0007610, GO:0007617, GO:0007618, GO:0007619, GO:0007626, GO:0008037, GO:0008038, GO:0008045, GO:0008049, GO:0008050, GO:0008092, GO:0008104, GO:0008150, GO:0008152, GO:0008344, GO:0008361, GO:0008366, GO:0009410, GO:0009605, GO:0009611, GO:0009636, GO:0009653, GO:0009719, GO:0009725, GO:0009790, GO:0009791, GO:0009792, GO:0009886, GO:0009887, GO:0009888, GO:0009893, GO:0009897, GO:0009966, GO:0009967, GO:0009986, GO:0009987, GO:0010001, GO:0010033, GO:0010243, GO:0010468, GO:0010604, GO:0010628, GO:0010646, GO:0010647, GO:0010720, GO:0010769, GO:0010770, GO:0010810, GO:0010811, GO:0010927, GO:0010941, GO:0010975, GO:0010976, GO:0012505, GO:0012506, GO:0014070, GO:0014823, GO:0016020, GO:0016021, GO:0016043, GO:0016049, GO:0016192, GO:0016319, GO:0016328, GO:0016338, GO:0016339, GO:0016358, GO:0016477, GO:0017154, GO:0018958, GO:0019098, GO:0019220, GO:0019222, GO:0019226, GO:0019227, GO:0019748, GO:0019899, GO:0019904, GO:0019953, GO:0019991, GO:0021675, GO:0021682, GO:0021700, GO:0021782, GO:0022008, GO:0022402, GO:0022407, GO:0022409, GO:0022414, GO:0022603, GO:0022604, GO:0022607, GO:0022610, GO:0023051, GO:0023052, GO:0023056, GO:0030010, GO:0030016, GO:0030017, GO:0030029, GO:0030030, GO:0030048, GO:0030054, GO:0030141, GO:0030154, GO:0030155, GO:0030165, GO:0030175, GO:0030182, GO:0030246, GO:0030247, GO:0030307, GO:0030424, GO:0030425, GO:0030426, GO:0030427, GO:0030506, GO:0030516, GO:0030534, GO:0030659, GO:0030667, GO:0030673, GO:0030855, GO:0030913, GO:0031090, GO:0031099, GO:0031102, GO:0031103, GO:0031175, GO:0031224, GO:0031226, GO:0031252, GO:0031253, GO:0031256, GO:0031290, GO:0031323, GO:0031344, GO:0031346, GO:0031399, GO:0031406, GO:0031410, GO:0031589, GO:0031960, GO:0031982, GO:0032101, GO:0032268, GO:0032288, GO:0032501, GO:0032502, GO:0032504, GO:0032535, GO:0032589, GO:0032590, GO:0032809, GO:0032870, GO:0032879, GO:0032940, GO:0032989, GO:0032990, GO:0033010, GO:0033036, GO:0033267, GO:0033268, GO:0033270, GO:0033554, GO:0033563, GO:0033564, GO:0033627, GO:0033631, GO:0033691, GO:0033993, GO:0034109, GO:0034113, GO:0034329, GO:0034330, GO:0034613, GO:0035006, GO:0035010, GO:0035011, GO:0035150, GO:0035151, GO:0035152, GO:0035239, GO:0035295, GO:0035637, GO:0035640, GO:0035690, GO:0036094, GO:0036230, GO:0036477, GO:0038023, GO:0038127, GO:0040001, GO:0040007, GO:0040008, GO:0040011, GO:0040012, GO:0042063, GO:0042074, GO:0042119, GO:0042221, GO:0042325, GO:0042330, GO:0042391, GO:0042440, GO:0042493, GO:0042551, GO:0042552, GO:0042734, GO:0042802, GO:0042981, GO:0042995, GO:0043005, GO:0043025, GO:0043066, GO:0043067, GO:0043069, GO:0043167, GO:0043168, GO:0043169, GO:0043177, GO:0043194, GO:0043195, GO:0043200, GO:0043209, GO:0043226, GO:0043227, GO:0043228, GO:0043229, GO:0043232, GO:0043292, GO:0043296, GO:0043297, GO:0043299, GO:0043312, GO:0043408, GO:0043523, GO:0043524, GO:0043621, GO:0043679, GO:0044085, GO:0044237, GO:0044292, GO:0044294, GO:0044295, GO:0044297, GO:0044298, GO:0044304, GO:0044306, GO:0044422, GO:0044424, GO:0044425, GO:0044433, GO:0044444, GO:0044446, GO:0044449, GO:0044456, GO:0044459, GO:0044463, GO:0044464, GO:0044703, GO:0044877, GO:0045055, GO:0045087, GO:0045121, GO:0045161, GO:0045162, GO:0045177, GO:0045202, GO:0045216, GO:0045321, GO:0045471, GO:0045595, GO:0045597, GO:0045664, GO:0045666, GO:0045773, GO:0045785, GO:0045924, GO:0045927, GO:0046677, GO:0046872, GO:0046903, GO:0046982, GO:0046983, GO:0048036, GO:0048468, GO:0048469, GO:0048513, GO:0048514, GO:0048518, GO:0048519, GO:0048522, GO:0048523, GO:0048545, GO:0048563, GO:0048569, GO:0048583, GO:0048584, GO:0048588, GO:0048589, GO:0048598, GO:0048609, GO:0048638, GO:0048639, GO:0048646, GO:0048666, GO:0048667, GO:0048675, GO:0048678, GO:0048699, GO:0048707, GO:0048729, GO:0048731, GO:0048812, GO:0048813, GO:0048814, GO:0048856, GO:0048858, GO:0048869, GO:0048870, GO:0050767, GO:0050769, GO:0050770, GO:0050772, GO:0050773, GO:0050775, GO:0050789, GO:0050793, GO:0050794, GO:0050808, GO:0050839, GO:0050848, GO:0050850, GO:0050877, GO:0050890, GO:0050896, GO:0050900, GO:0050920, GO:0051094, GO:0051128, GO:0051130, GO:0051171, GO:0051174, GO:0051179, GO:0051216, GO:0051234, GO:0051239, GO:0051240, GO:0051246, GO:0051270, GO:0051293, GO:0051294, GO:0051384, GO:0051640, GO:0051641, GO:0051649, GO:0051653, GO:0051656, GO:0051674, GO:0051704, GO:0051716, GO:0051960, GO:0051962, GO:0060089, GO:0060179, GO:0060180, GO:0060255, GO:0060284, GO:0060322, GO:0060429, GO:0060536, GO:0060541, GO:0060548, GO:0060560, GO:0060562, GO:0060856, GO:0060857, GO:0061024, GO:0061343, GO:0061387, GO:0061448, GO:0061564, GO:0065007, GO:0065008, GO:0070160, GO:0070161, GO:0070252, GO:0070372, GO:0070593, GO:0070727, GO:0070820, GO:0070848, GO:0070887, GO:0071205, GO:0071229, GO:0071230, GO:0071236, GO:0071310, GO:0071361, GO:0071363, GO:0071383, GO:0071384, GO:0071385, GO:0071396, GO:0071407, GO:0071417, GO:0071466, GO:0071495, GO:0071526, GO:0071542, GO:0071548, GO:0071549, GO:0071559, GO:0071560, GO:0071695, GO:0071704, GO:0071840, GO:0071944, GO:0072358, GO:0072359, GO:0072499, GO:0072657, GO:0072659, GO:0080090, GO:0086080, GO:0090066, GO:0097060, GO:0097066, GO:0097067, GO:0097068, GO:0097069, GO:0097237, GO:0097305, GO:0097306, GO:0097327, GO:0097367, GO:0097386, GO:0097447, GO:0097454, GO:0097458, GO:0097485, GO:0097708, GO:0098552, GO:0098588, GO:0098589, GO:0098590, GO:0098609, GO:0098631, GO:0098632, GO:0098742, GO:0098793, GO:0098805, GO:0098857, GO:0098858, GO:0098870, GO:0099080, GO:0099081, GO:0099503, GO:0099512, GO:0099612, GO:0101002, GO:0101003, GO:0106030, GO:0120025, GO:0120035, GO:0120036, GO:0120038, GO:0120039, GO:0150034, GO:1900006, GO:1901214, GO:1901215, GO:1901360, GO:1901615, GO:1901654, GO:1901655, GO:1901698, GO:1901699, GO:1901700, GO:1901701, GO:1902531, GO:1902533, GO:1902667, GO:1902850, GO:1903047, GO:1903859, GO:1904386, GO:1904387, GO:1990089, GO:1990090, GO:1990138, GO:1990778, GO:2000026
EC number -
KEGG KO K06550, K06756, K06757, K06758, K06760
KEGG pathway MAP04360, MAP04514
KEGG module -
KEGG reaction -
KEGG RClass -
BRITE ko00000, ko00001, ko00537, ko04090, ko04091, ko04516
KEGG TC -
CAZy -
BiGG reaction -
PFAMs Bravo_FIGEY,I-set,Ig_3,fn3,ig
InterProScan Annotation
Protein ID MD5 Length Analysis Signature Accession Signature Description Start End Score Status Date IPR Accession IPR Description GO Pathway
PE_Scaf7345_2.11 d76c47e1a8bf42a5d15bfb434ab6357a 254 MobiDBLite mobidb-lite consensus disorder prediction 150 159 - T 03-02-2026 - - - -
PE_Scaf7345_2.11 d76c47e1a8bf42a5d15bfb434ab6357a 254 MobiDBLite mobidb-lite consensus disorder prediction 150 254 - T 03-02-2026 - - - -
PE_Scaf7345_2.11 d76c47e1a8bf42a5d15bfb434ab6357a 254 MobiDBLite mobidb-lite consensus disorder prediction 174 187 - T 03-02-2026 - - - -
PE_Scaf7345_2.11 d76c47e1a8bf42a5d15bfb434ab6357a 254 MobiDBLite mobidb-lite consensus disorder prediction 241 254 - T 03-02-2026 - - - -
PE_Scaf7345_2.11 d76c47e1a8bf42a5d15bfb434ab6357a 254 Gene3D G3DSA:2.60.40.10 Immunoglobulins 6 79 6.0E-10 T 03-02-2026 IPR013783 Immunoglobulin-like fold - -
PE_Scaf7345_2.11 d76c47e1a8bf42a5d15bfb434ab6357a 254 Pfam PF00041 Fibronectin type III domain 25 62 0.0071 T 03-02-2026 IPR003961 Fibronectin type III - -
PE_Scaf7345_2.11 d76c47e1a8bf42a5d15bfb434ab6357a 254 Pfam PF13882 Bravo-like intracellular region 138 230 1.5E-20 T 03-02-2026 IPR026966 Neurofascin/L1/NrCAM, C-terminal domain - -
PE_Scaf7345_2.11 d76c47e1a8bf42a5d15bfb434ab6357a 254 SUPERFAMILY SSF49265 Fibronectin type III 9 69 1.21E-9 T 03-02-2026 IPR036116 Fibronectin type III superfamily - -
PE_Scaf7345_2.11 d76c47e1a8bf42a5d15bfb434ab6357a 254 CDD cd00063 FN3 9 66 8.74286E-8 T 03-02-2026 IPR003961 Fibronectin type III - -
PE_Scaf7345_2.11 d76c47e1a8bf42a5d15bfb434ab6357a 254 ProSiteProfiles PS50853 Fibronectin type-III domain profile. 1 70 12.860253 T 03-02-2026 IPR003961 Fibronectin type III - -
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