Gene Detail

View functional annotation, sequence and genome location for gene PE_Scaf7657_2.2.

PE_Scaf7657_2.2

Species: Paraescarpia echinospica

NCBI Taxonomy ID: 2080241

Preferred name: SLC22A5

Description: Solute carrier family 22 (organic cation transporter), member 21

Genome Location
  • Contig: Superscaffold1
  • Feature: gene
  • Coordinates: 17215981 - 17223598 (+)
  • Source file: Paraescarpia_echinospica.chr.gff3.gz

The bar shows the gene locus on the contig. It is an approximate visualization based on available GFF data.

Sequences
Protein Sequence
Paraescarpia_echinospica.chr.pep.fasta.gz (protein)
MLFDAILKEIGEFGPWQIVLYGLLGLVGIPTGFQNMGITFLGGEMDHWCHVPELSNLSGDQQRYISIPKDKDKPLTYSRCYMYALNYSGYNTDEFLSWNRSNRVDSNPETKKCTTWQYDQSVFTSTYVSAE*
CDS Sequence
Paraescarpia_echinospica.chr.CDS.fasta.gz (nucleotide)
ATGTTGTTTGACGCAATCCTGAAGGAGATCGGAGAGTTCGGACCATGGCAGATCGTGCTCTACGGCCTGTTAGGTCTCGTTGGCATACCAACAGGATTTCAGAACATGGGCATCACGTTTCTTGGTGGCGAAATGGACCACTGGTGCCATGTTCCTGAACTATCGAACCTCAGCGGAGACCAGCAGCGATACATCAGTATCCCAAAGGACAAGGACAAACCACTGACGTACAGTCGATGCTACATGTACGCGTTAAACTACAGCGGTTATAACACGGATGAGTTTCTGAGCTGGAATCGCAGCAATCGCGTTGACTCGAACCCAGAAACGAAGAAGTGTACGACGTGGCAGTACGACCAGTCAGTGTTTACGTCCACCTACGTCAGTGCGGAGTAA
Functional Annotation
Preferred name SLC22A5
Description Solute carrier family 22 (organic cation transporter), member 21
Seed ortholog 7918.ENSLOCP00000012681
E-value 1.7e-12
Score 70.9
EggNOG OGs KOG0255@1|root,KOG0255@2759|Eukaryota,38FJ1@33154|Opisthokonta,3B9N9@33208|Metazoa,3CT4W@33213|Bilateria,47ZGI@7711|Chordata,48VWJ@7742|Vertebrata,49QJG@7898|Actinopterygii
Max annotation level 2759|Eukaryota
COG category S
GOs
GO:0000003, GO:0000166, GO:0003006, GO:0003674, GO:0005215, GO:0005488, GO:0005515, GO:0005575, GO:0005622, GO:0005623, GO:0005737, GO:0005739
GO:0000003, GO:0000166, GO:0003006, GO:0003674, GO:0005215, GO:0005488, GO:0005515, GO:0005575, GO:0005622, GO:0005623, GO:0005737, GO:0005739, GO:0005777, GO:0005778, GO:0005886, GO:0005887, GO:0005903, GO:0006575, GO:0006577, GO:0006629, GO:0006638, GO:0006639, GO:0006641, GO:0006807, GO:0006810, GO:0006811, GO:0006812, GO:0006820, GO:0006855, GO:0006996, GO:0007005, GO:0007275, GO:0007507, GO:0007512, GO:0007589, GO:0007610, GO:0007626, GO:0008150, GO:0008152, GO:0008324, GO:0008509, GO:0008513, GO:0008514, GO:0008519, GO:0009372, GO:0009437, GO:0009987, GO:0015075, GO:0015101, GO:0015226, GO:0015238, GO:0015291, GO:0015297, GO:0015298, GO:0015491, GO:0015651, GO:0015695, GO:0015696, GO:0015697, GO:0015711, GO:0015838, GO:0015879, GO:0015893, GO:0016020, GO:0016021, GO:0016043, GO:0016323, GO:0016324, GO:0019904, GO:0022414, GO:0022804, GO:0022857, GO:0030165, GO:0031090, GO:0031224, GO:0031226, GO:0031231, GO:0031253, GO:0031300, GO:0031526, GO:0031903, GO:0032501, GO:0032502, GO:0034220, GO:0034641, GO:0036094, GO:0042221, GO:0042493, GO:0042579, GO:0042891, GO:0042895, GO:0042995, GO:0043226, GO:0043227, GO:0043229, GO:0043231, GO:0044057, GO:0044058, GO:0044237, GO:0044238, GO:0044255, GO:0044403, GO:0044419, GO:0044422, GO:0044424, GO:0044425, GO:0044438, GO:0044439, GO:0044444, GO:0044446, GO:0044459, GO:0044463, GO:0044464, GO:0044764, GO:0045177, GO:0046486, GO:0046903, GO:0048513, GO:0048518, GO:0048608, GO:0048731, GO:0048856, GO:0050789, GO:0050878, GO:0050896, GO:0051179, GO:0051234, GO:0051239, GO:0051240, GO:0051701, GO:0051704, GO:0052097, GO:0052106, GO:0055085, GO:0060456, GO:0060730, GO:0060731, GO:0061458, GO:0065007, GO:0065008, GO:0070715, GO:0071702, GO:0071704, GO:0071705, GO:0071840, GO:0071944, GO:0072337, GO:0072349, GO:0072359, GO:0072488, GO:0097159, GO:0097164, GO:0098588, GO:0098590, GO:0098655, GO:0098656, GO:0098805, GO:0098862, GO:0099516, GO:0120025, GO:0120038, GO:1901265, GO:1901363, GO:1901564, GO:1902603
EC number -
KEGG KO K08202, K08203
KEGG pathway MAP05231
KEGG module -
KEGG reaction -
KEGG RClass -
BRITE ko00000, ko00001, ko02000
KEGG TC 2.A.1.19.2, 2.A.1.19.3, 2.A.1.19.4
CAZy -
BiGG reaction -
PFAMs MFS_1,Sugar_tr
InterProScan Annotation
No InterProScan annotation rows were found for this gene.
Genome Browser