Ridgeia piscesae

NCBI Taxonomy ID: 27915

Taxonomy

  • PhylumAnnelida
  • ClassPolychaeta
  • OrderSabellida
  • FamilySiboglinidae
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Assembly Statistics

  • Size568.0 Mb
  • Repeat34.68 %
  • Assembly Levelscaffold
  • GC Content37.34 %
  • Scaffold N50234 kbp
  • Gene Count25,074
  • Gene Count (ANNEVO)19,560
GenomeS:94.3%,D:0.3%
GeneS:90.8%,D:0.6%
Gene (ANNEVO)S:90.5%,D:0.6%

BUSCO Completeness

BUSCO plot

Publication References

  • The genome of a vestimentiferan tubeworm (Ridgeia piscesae) provides insights into its adaptation to a deep-sea environment.
    BMC genomics · 2023-02-11
    10.1186/s12864-023-09166-y
    Authors: Wang M, Ruan L, Liu M, Liu Z, He J, Zhang L, Wang Y, Shi H, Chen M, Yang F, Zeng R, He J, Guo C, Chen J
  • Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea Polychaetes.
    Molecular biology and evolution · 2023-08-01
    10.1093/molbev/msad172
    Authors: Perez M, Aroh O, Sun Y, Lan Y, Juniper SK, Young CR, Angers B, Qian PY

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Annotation

Gene IDs in the first column link directly to the gene detail page.
query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs