Explore epigenome resources and external epigenome links for each species.
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Choose species with epigenome resources and download metadata directly.
| Class | Order | Family | Updated Clade 6 | Updated Clade 5 | Updated Clade 4 | Updated Clade 3 | Updated Clade 2 | Updated Clade 1 | Species | Modality | Tissue | Stage | Publication | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Polychaeta | Capitellida | Capitellidae | Polychaeta | Sedentaria | Canalipalpata | - | Capitellida | Capitellidae | Capitella teleta | methylation | multiple life stages | embryo / larva / adult | ||
| Polychaeta | Capitellida | Capitellidae | Polychaeta | Sedentaria | Canalipalpata | - | Capitellida | Capitellidae | Capitella teleta | methylation | developmental and aging time course | development / adult aging | ||
| Polychaeta | Capitellida | Capitellidae | Polychaeta | Sedentaria | Canalipalpata | - | Capitellida | Capitellidae | Capitella teleta | CUT&Tag / ATAC-seq | multiple tissues | developmental stages | ||
| Polychaeta | Capitellida | Capitellidae | Polychaeta | Sedentaria | Canalipalpata | - | Capitellida | Capitellidae | Capitella teleta | ATAC-seq / EM-seq / single-cell multi-omics | developmental stages | embryo / larva | ||
| Polychaeta | Chaetopterida | Chaetopteridae | Chaetopteriformia | - | - | - | - | - | Chaetopterus variopedatus | methylation | sperm, embryos, adults | gamete, embryonic, adult | ||
| Polychaeta | Dinophilida | Dinophilidae | Polychaeta | Sedentaria | non-Canalipalpata | - | - | Dinophilidae | Dimorphilus gyrociliatus | ATAC-seq | multiple tissues | developmental stages | ||
| Polychaeta | Dinophilida | Dinophilidae | Polychaeta | Sedentaria | non-Canalipalpata | - | - | Dinophilidae | Dimorphilus gyrociliatus | methylation | multiple life stages | embryo / larva / adult | ||
| Polychaeta | Dinophilida | Dinophilidae | Polychaeta | Sedentaria | non-Canalipalpata | - | - | Dinophilidae | Dimorphilus gyrociliatus | methylation | developmental and aging time course | development / adult aging | ||
| Polychaeta | Dinophilida | Dinophilidae | Polychaeta | Sedentaria | non-Canalipalpata | - | - | Dinophilidae | Dimorphilus gyrociliatus | CUT&Tag / ATAC-seq | multiple tissues | developmental stages | ||
| - | Crassiclitellata | Lumbricidae | - | - | - | - | - | - | Earthworms (species not specified) | methylation | whole body | adult field worms | ||
| Clitellata | Crassiclitellata | Lumbricidae | Polychaeta | Sedentaria | Canalipalpata | Oligochaeta | - | Clitellata | Lumbricus rubellus | methylation | whole body | adult field worms | ||
| Clitellata | Crassiclitellata | Lumbricidae | Polychaeta | Sedentaria | Canalipalpata | Oligochaeta | - | Clitellata | Lumbricus rubellus | methylation | whole body | adult chronic exposure | ||
| Clitellata | Crassiclitellata | Lumbricidae | Polychaeta | Sedentaria | Canalipalpata | Oligochaeta | - | Clitellata | Lumbricus terrestris | methylation | whole body / coelomocytes | adult exposure | ||
| - | Crassiclitellata | Lumbricidae | - | - | - | - | - | - | Octolasion lacteum | methylation | whole body | adult field worms | ||
| Polychaeta | Sabellida | Oweniidae | Oweniidae | - | - | - | - | - | Owenia fusiformis | methylation | multiple life stages | embryo / larva / adult | ||
| Polychaeta | Sabellida | Oweniidae | Oweniidae | - | - | - | - | - | Owenia fusiformis | methylation | developmental and aging time course | development / adult aging | ||
| Polychaeta | Sabellida | Oweniidae | Oweniidae | - | - | - | - | - | Owenia fusiformis | CUT&Tag / ATAC-seq | multiple tissues | developmental stages | ||
| Polychaeta | Sabellida | Siboglinidae | Polychaeta | Sedentaria | Canalipalpata | - | - | Siboglinidae | Paraescarpia echinospica | methylation | whole body / mixed tissues | adult deep-sea worms | ||
| Polychaeta | Terebellida | Alvinellidae | Polychaeta | Sedentaria | Canalipalpata | Terebellida | Terebelliformia | Alvinellidae | Paralvinella palmiformis | methylation | whole body / mixed tissues | adult deep-sea worms | ||
| Polychaeta | Phyllodocida | Nereididae | Polychaeta | Errantia | Phyllodocida | - | - | Nereididae | Platynereis dumerilii | miRNA | apical organ / forebrain | larval | ||
| Polychaeta | Phyllodocida | Nereididae | Polychaeta | Errantia | Phyllodocida | - | - | Nereididae | Platynereis dumerilii | miRNA | multiple tissues / tissue identity | comparative bilaterian | ||
| Polychaeta | Phyllodocida | Nereididae | Polychaeta | Errantia | Phyllodocida | - | - | Nereididae | Platynereis dumerilii | miRNA | apical organ / larval tissues | larval | ||
| Polychaeta | Phyllodocida | Nereididae | Polychaeta | Errantia | Phyllodocida | - | - | Nereididae | Platynereis dumerilii | methylation | developing and regenerating stages | development and regeneration | ||
| - | Phyllodocida | Nereididae | - | - | - | - | - | - | Platynereis spp. | miRNA | early developmental stages | embryo / larval | ||
| Polychaeta | Spionida | Spionidae | Polychaeta | Sedentaria | Canalipalpata | - | Spionida | Spionidae | Polydora cornuta | Other epigenome / histone modifications | whole animal | ontogeny / development | ||
| Polychaeta | Sabellida | Siboglinidae | Polychaeta | Sedentaria | Canalipalpata | - | - | Siboglinidae | Ridgeia piscesae | methylation | whole body / mixed tissues | adult deep-sea worms |