Aporrectodea caliginosa

NCBI Taxonomy ID: 302032

Taxonomy

  • PhylumAnnelida
  • ClassClitellata
  • OrderCrassiclitellata
  • FamilyLumbricidae
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Assembly Statistics

  • Size1092.0 Mb
  • Repeat55.74 %
  • Assembly Levelchromosome (16)
  • GC Content40.58 %
  • Scaffold N5065 Mbp
  • Gene Count19,309
  • Gene Count (ANNEVO)30,866
GenomeS:90.3%,D:4.5%
GeneS:75.9%,D:4.3%
Gene (ANNEVO)S:77.2%,D:3.3%

BUSCO Completeness

BUSCO plot

Publication References

  • Molecular insights into high-altitude adaption and acclimatisation of Aporrectodea caliginosa.
    Life science alliance · 2022-08-17
    10.26508/lsa.202201513
    Authors: Perry I, Hernadi SB, Cunha L, Short S, Marchbank A, Spurgeon DJ, Orozco-terWengel P, Kille P

Ancestral Linkage Groups

ALG Plot
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Oxford Plot Synteny

Oxford Plot
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Annotation

Gene IDs in the first column link directly to the gene detail page.
query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs