Lumbricus rubellus

NCBI Taxonomy ID: 35632

Taxonomy

  • PhylumAnnelida
  • ClassClitellata
  • OrderCrassiclitellata
  • FamilyLumbricidae
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Assembly Statistics

  • Size788.0 Mb
  • Repeat48.44 %
  • Assembly Levelchromosome (18)
  • GC Content40.45 %
  • Scaffold N5041 Mbp
  • Gene Count24,085
  • Gene Count (ANNEVO)30,667
GenomeS:90.9%,D:4.3%
GeneS:90.8%,D:4.9%
Gene (ANNEVO)S:83.6%,D:3.4%

BUSCO Completeness

BUSCO plot

Publication References

  • The genome sequence of the red compost earthworm, Lumbricus rubellus (Hoffmeister, 1843)
    Wellcome open research · 2023-08-18
    10.12688/wellcomeopenres.19834.1
    Authors: Short S, Green Etxabe A, Robinson A, Spurgeon D, Kille P, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium

Ancestral Linkage Groups

ALG Plot
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Oxford Plot Synteny

Oxford Plot
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Annotation

Gene IDs in the first column link directly to the gene detail page.
query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs