Harmothoe impar

NCBI Taxonomy ID: 46595

Taxonomy

  • PhylumAnnelida
  • ClassPolychaeta
  • OrderPhyllodocida
  • FamilyPolynoidae
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Assembly Statistics

  • Size1512.0 Mb
  • Repeat45.45 %
  • Assembly Levelchromosome (18)
  • GC Content42.74 %
  • Scaffold N5083 Mbp
  • Gene Count28,143
  • Gene Count (ANNEVO)42,559
GenomeS:91.4%,D:6.1%
GeneS:87.2%,D:3.9%
Gene (ANNEVO)S:89.4%,D:5.1%

BUSCO Completeness

BUSCO plot

Publication References

  • The genome sequence of a scale worm, Harmothoe impar (Johnston, 1839)
    Wellcome open research · 2023-07-20
    10.12688/wellcomeopenres.19570.1
    Authors: Adkins P, Mrowicki R, Harley J, Marine Biological Association Genome Acquisition Lab, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium
  • Genomic Analysis of a Scale Worm Provides Insights into Its Adaptation to Deep-Sea Hydrothermal Vents.
    Genome biology and evolution · 2023-07-01
    10.1093/gbe/evad125
    Authors: He X, Wang H, Xu T, Zhang Y, Chen C, Sun Y, Qiu JW, Zhou Y, Sun J

Ancestral Linkage Groups

ALG Plot
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Oxford Plot Synteny

Oxford Plot
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Annotation

Gene IDs in the first column link directly to the gene detail page.
query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs