Hirudo medicinalis

NCBI Taxonomy ID: 6421

Taxonomy

  • PhylumAnnelida
  • ClassClitellata
  • OrderHirudinida
  • FamilyHirudinidae
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Assembly Statistics

  • Size188.0 Mb
  • Repeat19.18 %
  • Assembly Levelscaffold
  • GC Content30.01 %
  • Scaffold N5097 kbp
  • Gene Count15,728
  • Gene Count (ANNEVO)14,837
GenomeS:85.6%,D:4.3%
GeneS:62.5%,D:5.8%
Gene (ANNEVO)S:67.4%,D:3.6%

BUSCO Completeness

BUSCO plot

Publication References

  • Draft genome of the European medicinal leech Hirudo medicinalis (Annelida, Clitellata, Hirudiniformes) with emphasis on anticoagulants.
    Scientific reports · 2020-06-18
    10.1038/s41598-020-66749-5
    Authors: Kvist S, Manzano-Mar’n A, de Carle D, Trontelj P, Siddall ME
  • Draft genome sequences of Hirudo medicinalis and salivary transcriptome of three closely related medicinal leeches.
    BMC genomics · 2020-04-29
    10.1186/s12864-020-6748-0
    Authors: Babenko VV, Podgorny OV, Manuvera VA, Kasianov AS, Manolov AI, Grafskaia EN, Shirokov DA, Kurdyumov AS, Vinogradov DV, Nikitina AS, Kovalchuk SI, Anikanov NA, Butenko IO, Pobeguts OV, Matyushkina DS, Rakitina DV, Kostryukova ES, Zgoda VG, Baskova IP, Trukhan VM, Gelfand MS, Govorun VM, Schišth HB, Lazarev VN

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Annotation

Gene IDs in the first column link directly to the gene detail page.
query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs