Alitta virens

NCBI Taxonomy ID: 880429

Taxonomy

  • PhylumAnnelida
  • ClassPolychaeta
  • OrderPhyllodocida
  • FamilyNereididae
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Assembly Statistics

  • Size671.0 Mb
  • Repeat40.6 %
  • Assembly Levelchromosome (14)
  • GC Content37.61 %
  • Scaffold N5042 Mbp
  • Gene Count28,474
  • Gene Count (ANNEVO)25,413
GenomeS:98.5%,D:0.3%
GeneS:97.8%,D:0.3%
Gene (ANNEVO)S:96.0%,D:0.6%

BUSCO Completeness

BUSCO plot

Publication References

  • The genome sequence of the King Ragworm, Alitta virens (Sars, 1835)
    Wellcome open research · 2023-07-11
    10.12688/wellcomeopenres.19642.1
    Authors: Fletcher C, Pereira da Conceicoa L, Natural History Museum Genome Acquisition Lab, Darwin Tree of Life Barcoding collective, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium

Ancestral Linkage Groups

ALG Plot
Download ALG Plot

Oxford Plot Synteny

Oxford Plot
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Annotation

Gene IDs in the first column link directly to the gene detail page.
query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs