Polydora hoplura
NCBI Taxonomy ID: 1495204
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Gene Features Summary
summary.1.txt
NC_061377.1
NCBI
| Length(bp) | 17707 |
|---|---|
| Circularity | yes |
| Protein-coding | 12 |
| tRNA | 23 |
| rRNA | 2 |
| Missing | ATP8 |
Gene Features
| Seq_id | Start | End | Length(bp) | Direction | Type | Gene_name | Gene_prodcut | Total_freq_occurred |
|---|---|---|---|---|---|---|---|---|
| NC_061377.1 | 1 | 67 | 67 | + | tRNA | trnK(uuu) | tRNA-Lys | 1 |
| NC_061377.1 | 62 | 1375 | 1314 | + | rRNA | l-rRNA | 16S ribosomal RNA | 1 |
| NC_061377.1 | 65 | 130 | 66 | + | tRNA | trnM(cau) | tRNA-Met | 2 |
| NC_061377.1 | 1341 | 1405 | 65 | + | tRNA | trnY(gua) | tRNA-Tyr | 1 |
| NC_061377.1 | 1410 | 1899 | 490 | + | CDS | ND6 | NADH dehydrogenase subunit 6 | 1 |
| NC_061377.1 | 2074 | 2139 | 66 | + | tRNA | trnG(ucc) | tRNA-Gly | 1 |
| NC_061377.1 | 2140 | 2209 | 70 | + | tRNA | trnN(guu) | tRNA-Asn | 1 |
| NC_061377.1 | 2209 | 2266 | 58 | + | tRNA | trnC(gca) | tRNA-Cys | 1 |
| NC_061377.1 | 2266 | 2331 | 66 | + | tRNA | trnQ(uug) | tRNA-Gln | 1 |
| NC_061377.1 | 3406 | 3471 | 66 | + | tRNA | trnA(ugc) | tRNA-Ala | 1 |
| NC_061377.1 | 3475 | 4271 | 797 | + | rRNA | s-rRNA | 12S ribosomal RNA | 1 |
| NC_061377.1 | 4280 | 4640 | 361 | + | CDS | ND3 | NADH dehydrogenase subunit 3 | 1 |
| NC_061377.1 | 5293 | 5359 | 67 | + | tRNA | trnL(uaa) | tRNA-Leu | 2 |
| NC_061377.1 | 5366 | 6489 | 1124 | + | CDS | CYTB | cytochrome b | 1 |
| NC_061377.1 | 6514 | 7870 | 1357 | + | CDS | ND4 | NADH dehydrogenase subunit 4 | 1 |
| NC_061377.1 | 7986 | 8761 | 776 | + | CDS | COX3 | cytochrome c oxidase subunit III | 1 |
| NC_061377.1 | 8790 | 8859 | 70 | + | tRNA | trnS(uga) | tRNA-Ser | 2 |
| NC_061377.1 | 8871 | 9625 | 755 | + | CDS | ATP6 | ATP synthase F0 subunit 6 | 1 |
| NC_061377.1 | 10115 | 10177 | 63 | + | tRNA | trnR(ucg) | tRNA-Arg | 1 |
| NC_061377.1 | 10153 | 11890 | 1738 | + | CDS | ND5 | NADH dehydrogenase subunit 5 | 1 |
| NC_061377.1 | 11890 | 11956 | 67 | + | tRNA | trnF(gaa) | tRNA-Phe | 1 |
| NC_061377.1 | 11986 | 12250 | 265 | + | CDS | ND4L | NADH dehydrogenase subunit 4L | 1 |
| NC_061377.1 | 12248 | 12313 | 66 | + | tRNA | trnI(gau) | tRNA-Ile | 1 |
| NC_061377.1 | 12313 | 13024 | 712 | + | CDS | COX2 | cytochrome c oxidase subunit II | 1 |
| NC_061377.1 | 13025 | 13090 | 66 | + | tRNA | trnW(uca) | tRNA-Trp | 1 |
| NC_061377.1 | 13090 | 13157 | 68 | + | tRNA | trnV(uac) | tRNA-Val | 1 |
| NC_061377.1 | 13157 | 13224 | 68 | + | tRNA | trnL(uag) | tRNA-Leu | 2 |
| NC_061377.1 | 13224 | 13290 | 67 | + | tRNA | trnM(cau) | tRNA-Met | 2 |
| NC_061377.1 | 13307 | 14226 | 920 | + | CDS | ND1 | NADH dehydrogenase subunit 1 | 1 |
| NC_061377.1 | 14214 | 14279 | 66 | + | tRNA | trnP(ugg) | tRNA-Pro | 1 |
| NC_061377.1 | 14279 | 14344 | 66 | + | tRNA | trnT(ugu) | tRNA-Thr | 1 |
| NC_061377.1 | 14345 | 14411 | 67 | + | tRNA | trnS(ucu) | tRNA-Ser | 2 |
| NC_061377.1 | 14431 | 15379 | 949 | + | CDS | ND2 | NADH dehydrogenase subunit 2 | 1 |
| NC_061377.1 | 15356 | 16907 | 1552 | + | CDS | COX1 | cytochrome c oxidase subunit I | 1 |
| NC_061377.1 | 16944 | 17007 | 64 | + | tRNA | trnH(gug) | tRNA-His | 1 |
| NC_061377.1 | 17007 | 17071 | 65 | + | tRNA | trnD(guc) | tRNA-Asp | 1 |
| NC_061377.1 | 17071 | 17136 | 66 | + | tRNA | trnE(uuc) | tRNA-Glu | 1 |