Ridgeia piscesae
NCBI Taxonomy ID: 27915
Circos Plot
Download Fasta Files
Select files and add them to the Download Bar for a combined archive.
Gene Features Summary
summary.1.txt
NC_024653.1
NCBI
| Length(bp) | 15002 |
|---|---|
| Circularity | yes |
| Protein-coding | 13 |
| tRNA | 22 |
| rRNA | 2 |
Gene Features
| Seq_id | Start | End | Length(bp) | Direction | Type | Gene_name | Gene_prodcut | Total_freq_occurred |
|---|---|---|---|---|---|---|---|---|
| NC_024653.1 | 17 | 79 | 63 | + | tRNA | trnR(ucg) | tRNA-Arg | 1 |
| NC_024653.1 | 384 | 446 | 63 | + | tRNA | trnH(gug) | tRNA-His | 1 |
| NC_024653.1 | 446 | 2145 | 1700 | + | CDS | ND5 | NADH dehydrogenase subunit 5 | 1 |
| NC_024653.1 | 2145 | 2208 | 64 | + | tRNA | trnF(gaa) | tRNA-Phe | 1 |
| NC_024653.1 | 2208 | 2275 | 68 | + | tRNA | trnE(uuc) | tRNA-Glu | 1 |
| NC_024653.1 | 2295 | 2359 | 65 | + | tRNA | trnP(ugg) | tRNA-Pro | 1 |
| NC_024653.1 | 2361 | 2426 | 66 | + | tRNA | trnT(ugu) | tRNA-Thr | 1 |
| NC_024653.1 | 2420 | 2717 | 298 | + | CDS | ND4L | NADH dehydrogenase subunit 4L | 1 |
| NC_024653.1 | 2710 | 4054 | 1345 | + | CDS | ND4 | NADH dehydrogenase subunit 4 | 1 |
| NC_024653.1 | 4052 | 4115 | 64 | + | tRNA | trnC(gca) | tRNA-Cys | 1 |
| NC_024653.1 | 4115 | 4179 | 65 | + | tRNA | trnM(cau) | tRNA-Met | 1 |
| NC_024653.1 | 4178 | 5018 | 841 | + | rRNA | s-rRNA | 12S ribosomal RNA | 1 |
| NC_024653.1 | 5011 | 5078 | 68 | + | tRNA | trnV(uac) | tRNA-Val | 1 |
| NC_024653.1 | 5044 | 6380 | 1337 | + | rRNA | l-rRNA | 16S ribosomal RNA | 1 |
| NC_024653.1 | 6379 | 6443 | 65 | + | tRNA | trnL(uag) | tRNA-Leu | 2 |
| NC_024653.1 | 6450 | 6514 | 65 | + | tRNA | trnA(ugc) | tRNA-Ala | 1 |
| NC_024653.1 | 6520 | 6587 | 68 | + | tRNA | trnS(uga) | tRNA-Ser | 2 |
| NC_024653.1 | 6588 | 6650 | 63 | + | tRNA | trnL(uaa) | tRNA-Leu | 2 |
| NC_024653.1 | 6648 | 7578 | 931 | + | CDS | ND1 | NADH dehydrogenase subunit 1 | 1 |
| NC_024653.1 | 7577 | 7646 | 70 | + | tRNA | trnI(gau) | tRNA-Ile | 1 |
| NC_024653.1 | 7652 | 7719 | 68 | + | tRNA | trnK(uuu) | tRNA-Lys | 1 |
| NC_024653.1 | 7719 | 8070 | 352 | + | CDS | ND3 | NADH dehydrogenase subunit 3 | 1 |
| NC_024653.1 | 8071 | 8139 | 69 | + | tRNA | trnS(ucu) | tRNA-Ser | 2 |
| NC_024653.1 | 8139 | 9156 | 1018 | + | CDS | ND2 | NADH dehydrogenase subunit 2 | 1 |
| NC_024653.1 | 9133 | 10706 | 1574 | + | CDS | COX1 | cytochrome c oxidase subunit I | 1 |
| NC_024653.1 | 10689 | 10752 | 64 | + | tRNA | trnN(guu) | tRNA-Asn | 1 |
| NC_024653.1 | 10752 | 11439 | 688 | + | CDS | COX2 | cytochrome c oxidase subunit II | 1 |
| NC_024653.1 | 11437 | 11501 | 65 | + | tRNA | trnD(guc) | tRNA-Asp | 1 |
| NC_024653.1 | 11502 | 11661 | 160 | + | CDS | ATP8 | ATP synthase F0 subunit 8 | 1 |
| NC_024653.1 | 11659 | 11721 | 63 | + | tRNA | trnY(gua) | tRNA-Tyr | 1 |
| NC_024653.1 | 11721 | 11785 | 65 | + | tRNA | trnG(ucc) | tRNA-Gly | 1 |
| NC_024653.1 | 11785 | 12565 | 781 | + | CDS | COX3 | cytochrome c oxidase subunit III | 1 |
| NC_024653.1 | 12568 | 12637 | 70 | + | tRNA | trnQ(uug) | tRNA-Gln | 1 |
| NC_024653.1 | 12637 | 13117 | 481 | + | CDS | ND6 | NADH dehydrogenase subunit 6 | 1 |
| NC_024653.1 | 13109 | 14270 | 1162 | + | CDS | CYTB | cytochrome b | 1 |
| NC_024653.1 | 14250 | 14313 | 64 | + | tRNA | trnW(uca) | tRNA-Trp | 1 |
| NC_024653.1 | 14313 | 15003 | 691 | + | CDS | ATP6 | ATP synthase F0 subunit 6 | 1 |