Circos Plot

Circos Plot

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Gene Features Summary

summary.1.txt
NC_087882.1 NCBI
Length(bp) 15488
Circularity yes
Protein-coding 13
tRNA 19
rRNA 2
Missing tRNA-Arg,tRNA-Ile,tRNA-Ser

Gene Features

Seq_id Start End Length(bp) Direction Type Gene_name Gene_prodcut Total_freq_occurred
NC_087882.1 627 694 68 + tRNA trnH(gug) tRNA-His 1
NC_087882.1 701 2438 1738 + CDS ND5 NADH dehydrogenase subunit 5 1
NC_087882.1 2412 2476 65 + tRNA trnF(gaa) tRNA-Phe 1
NC_087882.1 2479 2547 69 + tRNA trnE(uuc) tRNA-Glu 1
NC_087882.1 2547 2612 66 + tRNA trnP(ugg) tRNA-Pro 1
NC_087882.1 2612 2675 64 + tRNA trnT(ugu) tRNA-Thr 1
NC_087882.1 2675 2963 289 + CDS ND4L NADH dehydrogenase subunit 4L 1
NC_087882.1 2956 4292 1337 + CDS ND4 NADH dehydrogenase subunit 4 1
NC_087882.1 4304 4369 66 + tRNA trnC(gca) tRNA-Cys 1
NC_087882.1 4378 4443 66 + tRNA trnM(cau) tRNA-Met 1
NC_087882.1 4441 5316 876 + rRNA s-rRNA 12S ribosomal RNA 1
NC_087882.1 5315 5385 71 + tRNA trnV(uac) tRNA-Val 1
NC_087882.1 5330 6723 1394 + rRNA l-rRNA 16S ribosomal RNA 1
NC_087882.1 6713 6777 65 + tRNA trnL(uag) tRNA-Leu 2
NC_087882.1 6780 6847 68 + tRNA trnS(uga) tRNA-Ser 1
NC_087882.1 6848 6913 66 + tRNA trnA(ugc) tRNA-Ala 1
NC_087882.1 6914 6983 70 + tRNA trnL(uaa) tRNA-Leu 2
NC_087882.1 6984 7914 931 + CDS ND1 NADH dehydrogenase subunit 1 1
NC_087882.1 7988 8055 68 + tRNA trnK(uuu) tRNA-Lys 1
NC_087882.1 8055 8407 353 + CDS ND3 NADH dehydrogenase subunit 3 1
NC_087882.1 8477 9485 1009 + CDS ND2 NADH dehydrogenase subunit 2 1
NC_087882.1 9499 11041 1543 + CDS COX1 cytochrome c oxidase subunit I 1
NC_087882.1 11043 11113 71 + tRNA trnN(guu) tRNA-Asn 1
NC_087882.1 11113 11815 703 + CDS COX2 cytochrome c oxidase subunit II 1
NC_087882.1 11801 11866 66 + tRNA trnD(guc) tRNA-Asp 1
NC_087882.1 11866 12028 163 + CDS ATP8 ATP synthase F0 subunit 8 1
NC_087882.1 12027 12094 68 + tRNA trnY(gua) tRNA-Tyr 1
NC_087882.1 12094 12159 66 + tRNA trnG(ucc) tRNA-Gly 1
NC_087882.1 12159 12957 799 + CDS COX3 cytochrome c oxidase subunit III 1
NC_087882.1 12938 13007 70 + tRNA trnQ(uug) tRNA-Gln 1
NC_087882.1 13007 13481 475 + CDS ND6 NADH dehydrogenase subunit 6 1
NC_087882.1 13485 14625 1141 + CDS CYTB cytochrome b 1
NC_087882.1 14623 14688 66 + tRNA trnW(uca) tRNA-Trp 1
NC_087882.1 14688 15384 697 + CDS ATP6 ATP synthase F0 subunit 6 1