Metaphire californica
NCBI Taxonomy ID: 298374
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Gene Features Summary
summary.1.txt
NC_027257.1
NCBI
| Length(bp) | 15147 |
|---|---|
| Circularity | yes |
| Protein-coding | 13 |
| tRNA | 22 |
| rRNA | 2 |
Gene Features
| Seq_id | Start | End | Length(bp) | Direction | Type | Gene_name | Gene_prodcut | Total_freq_occurred |
|---|---|---|---|---|---|---|---|---|
| NC_027257.1 | 1 | 1543 | 1543 | + | CDS | COX1 | cytochrome c oxidase subunit I | 1 |
| NC_027257.1 | 1551 | 1613 | 63 | + | tRNA | trnN(guu) | tRNA-Asn | 1 |
| NC_027257.1 | 1614 | 2298 | 685 | + | CDS | COX2 | cytochrome c oxidase subunit II | 1 |
| NC_027257.1 | 2300 | 2362 | 63 | + | tRNA | trnD(guc) | tRNA-Asp | 1 |
| NC_027257.1 | 2362 | 2542 | 181 | + | CDS | ATP8 | ATP synthase F0 subunit 8 | 1 |
| NC_027257.1 | 2522 | 2582 | 61 | + | tRNA | trnY(gua) | tRNA-Tyr | 1 |
| NC_027257.1 | 2582 | 2647 | 66 | + | tRNA | trnG(ucc) | tRNA-Gly | 1 |
| NC_027257.1 | 2648 | 3431 | 784 | + | CDS | COX3 | cytochrome c oxidase subunit III | 1 |
| NC_027257.1 | 3426 | 3495 | 70 | + | tRNA | trnQ(uug) | tRNA-Gln | 1 |
| NC_027257.1 | 3495 | 3969 | 475 | + | CDS | ND6 | NADH dehydrogenase subunit 6 | 1 |
| NC_027257.1 | 3961 | 5101 | 1141 | + | CDS | CYTB | cytochrome b | 1 |
| NC_027257.1 | 5099 | 5163 | 65 | + | tRNA | trnW(uca) | tRNA-Trp | 1 |
| NC_027257.1 | 5165 | 5861 | 697 | + | CDS | ATP6 | ATP synthase F0 subunit 6 | 1 |
| NC_027257.1 | 5859 | 5922 | 64 | + | tRNA | trnR(ucg) | tRNA-Arg | 1 |
| NC_027257.1 | 6490 | 6554 | 65 | + | tRNA | trnH(gug) | tRNA-His | 1 |
| NC_027257.1 | 6554 | 8291 | 1738 | + | CDS | ND5 | NADH dehydrogenase subunit 5 | 1 |
| NC_027257.1 | 8271 | 8334 | 64 | + | tRNA | trnF(gaa) | tRNA-Phe | 1 |
| NC_027257.1 | 8334 | 8398 | 65 | + | tRNA | trnE(uuc) | tRNA-Glu | 1 |
| NC_027257.1 | 8398 | 8460 | 63 | + | tRNA | trnP(ugg) | tRNA-Pro | 1 |
| NC_027257.1 | 8460 | 8525 | 66 | + | tRNA | trnT(ugu) | tRNA-Thr | 1 |
| NC_027257.1 | 8525 | 8822 | 298 | + | CDS | ND4L | NADH dehydrogenase subunit 4L | 1 |
| NC_027257.1 | 8815 | 10172 | 1358 | + | CDS | ND4 | NADH dehydrogenase subunit 4 | 1 |
| NC_027257.1 | 10172 | 10237 | 66 | + | tRNA | trnC(gca) | tRNA-Cys | 1 |
| NC_027257.1 | 10237 | 10300 | 64 | + | tRNA | trnM(cau) | tRNA-Met | 1 |
| NC_027257.1 | 10298 | 11099 | 802 | + | rRNA | s-rRNA | 12S ribosomal RNA | 1 |
| NC_027257.1 | 11093 | 11157 | 65 | + | tRNA | trnV(uac) | tRNA-Val | 1 |
| NC_027257.1 | 11113 | 12418 | 1306 | + | rRNA | l-rRNA | 16S ribosomal RNA | 1 |
| NC_027257.1 | 12411 | 12474 | 64 | + | tRNA | trnL(uag) | tRNA-Leu | 2 |
| NC_027257.1 | 12477 | 12537 | 61 | + | tRNA | trnA(ugc) | tRNA-Ala | 1 |
| NC_027257.1 | 12537 | 12603 | 67 | + | tRNA | trnS(uga) | tRNA-Ser | 2 |
| NC_027257.1 | 12603 | 12665 | 63 | + | tRNA | trnL(uaa) | tRNA-Leu | 2 |
| NC_027257.1 | 12666 | 13590 | 925 | + | CDS | ND1 | NADH dehydrogenase subunit 1 | 1 |
| NC_027257.1 | 13589 | 13654 | 66 | + | tRNA | trnI(gau) | tRNA-Ile | 1 |
| NC_027257.1 | 13654 | 13719 | 66 | + | tRNA | trnK(uuu) | tRNA-Lys | 1 |
| NC_027257.1 | 13719 | 14076 | 358 | + | CDS | ND3 | NADH dehydrogenase subunit 3 | 1 |
| NC_027257.1 | 14077 | 14141 | 65 | + | tRNA | trnS(ucu) | tRNA-Ser | 2 |
| NC_027257.1 | 14142 | 15148 | 1007 | + | CDS | ND2 | NADH dehydrogenase subunit 2 | 1 |