Chaetopterus variopedatus
NCBI Taxonomy ID: 34590
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Gene Features Summary
summary.1.txt
NC_028710.1
NCBI
| Length(bp) | 16143 |
|---|---|
| Circularity | yes |
| Protein-coding | 13 |
| tRNA | 23 |
| rRNA | 2 |
Gene Features
| Seq_id | Start | End | Length(bp) | Direction | Type | Gene_name | Gene_prodcut | Total_freq_occurred |
|---|---|---|---|---|---|---|---|---|
| NC_028710.1 | <7 | 1865 | 1859 | + | CDS | COX1 | cytochrome c oxidase subunit I | 1 |
| NC_028710.1 | 1865 | 1929 | 65 | + | tRNA | trnA(ugc) | tRNA-Ala | 1 |
| NC_028710.1 | 1931 | 1999 | 69 | + | tRNA | trnL(uaa) | tRNA-Leu | 2 |
| NC_028710.1 | 1999 | 2929 | 931 | + | CDS | ND1 | NADH dehydrogenase subunit 1 | 1 |
| NC_028710.1 | 2934 | 3002 | 69 | + | tRNA | trnR(ucg) | tRNA-Arg | 1 |
| NC_028710.1 | 3008 | 3073 | 66 | + | tRNA | trnT(ugu) | tRNA-Thr | 1 |
| NC_028710.1 | 3101 | 3167 | 67 | + | tRNA | trnI(gau) | tRNA-Ile | 1 |
| NC_028710.1 | 3168 | 3654 | 487 | + | CDS | ND6 | NADH dehydrogenase subunit 6 | 1 |
| NC_028710.1 | 3678 | 3745 | 68 | + | tRNA | trnG(ucc) | tRNA-Gly | 1 |
| NC_028710.1 | 3746 | 4457 | 712 | + | CDS | ATP6 | ATP synthase F0 subunit 6 | 1 |
| NC_028710.1 | 4468 | 4535 | 68 | + | tRNA | trnQ(uug) | tRNA-Gln | 1 |
| NC_028710.1 | 4539 | 4600 | 62 | + | tRNA | trnW(uca) | tRNA-Trp | 1 |
| NC_028710.1 | 4602 | 4669 | 68 | + | tRNA | trnC(gca) | tRNA-Cys | 1 |
| NC_028710.1 | 4670 | 4734 | 65 | + | tRNA | trnM(cau) | tRNA-Met | 2 |
| NC_028710.1 | 4744 | 4808 | 65 | + | tRNA | trnY(gua) | tRNA-Tyr | 1 |
| NC_028710.1 | 4808 | 4872 | 65 | + | tRNA | trnM(cau) | tRNA-Met | 2 |
| NC_028710.1 | 4870 | 5735 | 866 | + | rRNA | s-rRNA | 12S ribosomal RNA | 1 |
| NC_028710.1 | 5727 | 5792 | 66 | + | tRNA | trnV(uac) | tRNA-Val | 1 |
| NC_028710.1 | 5758 | 7131 | 1374 | + | rRNA | l-rRNA | 16S ribosomal RNA | 1 |
| NC_028710.1 | 7145 | 7209 | 65 | + | tRNA | trnL(uag) | tRNA-Leu | 2 |
| NC_028710.1 | 7237 | 7588 | 352 | + | CDS | ND3 | NADH dehydrogenase subunit 3 | 1 |
| NC_028710.1 | 7588 | 7657 | 70 | + | tRNA | trnS(gcu) | tRNA-Ser | 2 |
| NC_028710.1 | 7693 | 8621 | 929 | + | CDS | ND2 | NADH dehydrogenase subunit 2 | 1 |
| NC_028710.1 | 8655 | 8727 | 73 | + | tRNA | trnP(ugg) | tRNA-Pro | 1 |
| NC_028710.1 | <9359 | 10496 | 1138 | + | CDS | CYTB | cytochrome b | 1 |
| NC_028710.1 | 10505 | 10572 | 68 | + | tRNA | trnS(uga) | tRNA-Ser | 2 |
| NC_028710.1 | 10581 | 10863 | 283 | + | CDS | ND4L | NADH dehydrogenase subunit 4L | 1 |
| NC_028710.1 | 10934 | 12227 | 1294 | + | CDS | ND4 | NADH dehydrogenase subunit 4 | 1 |
| NC_028710.1 | 12235 | 12298 | 64 | + | tRNA | trnH(gug) | tRNA-His | 1 |
| NC_028710.1 | 12388 | 14002 | 1615 | + | CDS | ND5 | NADH dehydrogenase subunit 5 | 1 |
| NC_028710.1 | 14089 | 14152 | 64 | + | tRNA | trnE(uuc) | tRNA-Glu | 1 |
| NC_028710.1 | 14162 | 14228 | 67 | + | tRNA | trnF(gaa) | tRNA-Phe | 1 |
| NC_028710.1 | 14227 | 15022 | 796 | + | CDS | COX3 | cytochrome c oxidase subunit III | 1 |
| NC_028710.1 | 15008 | 15075 | 68 | + | tRNA | trnK(uuu) | tRNA-Lys | 1 |
| NC_028710.1 | 15076 | 15769 | 694 | + | CDS | COX2 | cytochrome c oxidase subunit II | 1 |
| NC_028710.1 | 15769 | 15835 | 67 | + | tRNA | trnD(guc) | tRNA-Asp | 1 |
| NC_028710.1 | 15837 | 15993 | 157 | + | CDS | ATP8 | ATP synthase F0 subunit 8 | 1 |
| NC_028710.1 | 16010 | 16077 | 68 | + | tRNA | trnN(guu) | tRNA-Asn | 1 |