Sirsoe methanicola
NCBI Taxonomy ID: 378374
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Gene Features Summary
summary.1.txt
NC_064058.1
NCBI
| Length(bp) | 17403 |
|---|---|
| Circularity | yes |
| Protein-coding | 13 |
| tRNA | 23 |
| rRNA | 2 |
Gene Features
| Seq_id | Start | End | Length(bp) | Direction | Type | Gene_name | Gene_prodcut | Total_freq_occurred |
|---|---|---|---|---|---|---|---|---|
| NC_064058.1 | 808 | 872 | 65 | + | tRNA | trnP(ugg) | tRNA-Pro | 1 |
| NC_064058.1 | 875 | 941 | 67 | + | tRNA | trnT(ugu) | tRNA-Thr | 1 |
| NC_064058.1 | 941 | 1226 | 286 | + | CDS | ND4L | NADH dehydrogenase subunit 4L | 1 |
| NC_064058.1 | 1219 | 2582 | 1364 | + | CDS | ND4 | NADH dehydrogenase subunit 4 | 1 |
| NC_064058.1 | 2582 | 2645 | 64 | + | tRNA | trnC(gca) | tRNA-Cys | 1 |
| NC_064058.1 | 2646 | 2710 | 65 | + | tRNA | trnG(ucc) | tRNA-Gly | 1 |
| NC_064058.1 | 2711 | 2774 | 64 | + | tRNA | trnM(cau) | tRNA-Met | 2 |
| NC_064058.1 | 2774 | 2838 | 65 | + | tRNA | trnM(cau) | tRNA-Met | 2 |
| NC_064058.1 | 2837 | 3649 | 813 | + | rRNA | s-rRNA | 12S ribosomal RNA | 1 |
| NC_064058.1 | 3643 | 3707 | 65 | + | tRNA | trnV(uac) | tRNA-Val | 1 |
| NC_064058.1 | 3689 | 5024 | 1336 | + | rRNA | l-rRNA | 16S ribosomal RNA | 1 |
| NC_064058.1 | 5001 | 5066 | 66 | + | tRNA | trnL(uag) | tRNA-Leu | 2 |
| NC_064058.1 | 5069 | 5133 | 65 | + | tRNA | trnA(ugc) | tRNA-Ala | 1 |
| NC_064058.1 | 5134 | 5204 | 71 | + | tRNA | trnS(uga) | tRNA-Ser | 2 |
| NC_064058.1 | 5237 | 5299 | 63 | + | tRNA | trnL(uaa) | tRNA-Leu | 2 |
| NC_064058.1 | <5481 | 6350 | 870 | + | CDS | ND1 | NADH dehydrogenase subunit 1 | 1 |
| NC_064058.1 | 6346 | 6411 | 66 | + | tRNA | trnI(gau) | tRNA-Ile | 1 |
| NC_064058.1 | 6422 | 6776 | 355 | + | CDS | ND3 | NADH dehydrogenase subunit 3 | 1 |
| NC_064058.1 | 6774 | 6842 | 69 | + | tRNA | trnS(ucu) | tRNA-Ser | 2 |
| NC_064058.1 | 6854 | 7854 | 1001 | + | CDS | ND2 | NADH dehydrogenase subunit 2 | 1 |
| NC_064058.1 | 7860 | 9396 | 1537 | + | CDS | COX1 | cytochrome c oxidase subunit I | 1 |
| NC_064058.1 | 9405 | 9472 | 68 | + | tRNA | trnN(guu) | tRNA-Asn | 1 |
| NC_064058.1 | 9472 | >10156 | 685 | + | CDS | COX2 | cytochrome c oxidase subunit II | 1 |
| NC_064058.1 | 10292 | 10356 | 65 | + | tRNA | trnD(guc) | tRNA-Asp | 1 |
| NC_064058.1 | 10356 | 10518 | 163 | + | CDS | ATP8 | ATP synthase F0 subunit 8 | 1 |
| NC_064058.1 | 10516 | 10580 | 65 | + | tRNA | trnY(gua) | tRNA-Tyr | 1 |
| NC_064058.1 | 10581 | 11364 | 784 | + | CDS | COX3 | cytochrome c oxidase subunit III | 1 |
| NC_064058.1 | 11359 | 11429 | 71 | + | tRNA | trnQ(uug) | tRNA-Gln | 1 |
| NC_064058.1 | 11429 | 11900 | 472 | + | CDS | ND6 | NADH dehydrogenase subunit 6 | 1 |
| NC_064058.1 | 11892 | 13032 | 1141 | + | CDS | CYTB | cytochrome b | 1 |
| NC_064058.1 | 13030 | 13093 | 64 | + | tRNA | trnW(uca) | tRNA-Trp | 1 |
| NC_064058.1 | 13093 | 13790 | 698 | + | CDS | ATP6 | ATP synthase F0 subunit 6 | 1 |
| NC_064058.1 | 13790 | 13853 | 64 | + | tRNA | trnR(ucg) | tRNA-Arg | 1 |
| NC_064058.1 | 13853 | 13917 | 65 | + | tRNA | trnH(gug) | tRNA-His | 1 |
| NC_064058.1 | 13917 | 15627 | 1711 | + | CDS | ND5 | NADH dehydrogenase subunit 5 | 1 |
| NC_064058.1 | 15622 | 15688 | 67 | + | tRNA | trnF(gaa) | tRNA-Phe | 1 |
| NC_064058.1 | 15688 | 15754 | 67 | + | tRNA | trnK(uuu) | tRNA-Lys | 1 |
| NC_064058.1 | 15754 | 15821 | 68 | + | tRNA | trnE(uuc) | tRNA-Glu | 1 |