Riftia pachyptila
NCBI Taxonomy ID: 6426
Circos Plot
Download Fasta Files
Select files and add them to the Download Bar for a combined archive.
Gene Features Summary
summary.1.txt
NC_026860.1
NCBI
| Length(bp) | 14987 |
|---|---|
| Circularity | yes |
| Protein-coding | 13 |
| tRNA | 22 |
| rRNA | 2 |
Gene Features
| Seq_id | Start | End | Length(bp) | Direction | Type | Gene_name | Gene_prodcut | Total_freq_occurred |
|---|---|---|---|---|---|---|---|---|
| NC_026860.1 | 264 | 327 | 64 | + | tRNA | trnH(gug) | tRNA-His | 1 |
| NC_026860.1 | 327 | 2026 | 1700 | + | CDS | ND5 | NADH dehydrogenase subunit 5 | 1 |
| NC_026860.1 | 2026 | 2092 | 67 | + | tRNA | trnF(gaa) | tRNA-Phe | 1 |
| NC_026860.1 | 2094 | 2161 | 68 | + | tRNA | trnE(uuc) | tRNA-Glu | 1 |
| NC_026860.1 | 2167 | 2233 | 67 | + | tRNA | trnP(ugg) | tRNA-Pro | 1 |
| NC_026860.1 | 2234 | 2298 | 65 | + | tRNA | trnT(ugu) | tRNA-Thr | 1 |
| NC_026860.1 | 2298 | 2589 | 292 | + | CDS | ND4L | NADH dehydrogenase subunit 4L | 1 |
| NC_026860.1 | 2582 | 3926 | 1345 | + | CDS | ND4 | NADH dehydrogenase subunit 4 | 1 |
| NC_026860.1 | 3924 | 3987 | 64 | + | tRNA | trnC(gca) | tRNA-Cys | 1 |
| NC_026860.1 | 3987 | 4051 | 65 | + | tRNA | trnM(cau) | tRNA-Met | 1 |
| NC_026860.1 | 4050 | 4894 | 845 | + | rRNA | s-rRNA | 12S ribosomal RNA | 1 |
| NC_026860.1 | 4887 | 4954 | 68 | + | tRNA | trnV(uac) | tRNA-Val | 1 |
| NC_026860.1 | 4930 | 6266 | 1337 | + | rRNA | l-rRNA | 16S ribosomal RNA | 1 |
| NC_026860.1 | 6264 | 6329 | 66 | + | tRNA | trnL(uag) | tRNA-Leu | 2 |
| NC_026860.1 | 6334 | 6397 | 64 | + | tRNA | trnA(ugc) | tRNA-Ala | 1 |
| NC_026860.1 | 6397 | 6464 | 68 | + | tRNA | trnS(uga) | tRNA-Ser | 2 |
| NC_026860.1 | 6466 | 6528 | 63 | + | tRNA | trnL(uaa) | tRNA-Leu | 2 |
| NC_026860.1 | 6529 | 7456 | 928 | + | CDS | ND1 | NADH dehydrogenase subunit 1 | 1 |
| NC_026860.1 | 7455 | 7523 | 69 | + | tRNA | trnI(gau) | tRNA-Ile | 1 |
| NC_026860.1 | 7538 | 7603 | 66 | + | tRNA | trnK(uuu) | tRNA-Lys | 1 |
| NC_026860.1 | 7603 | 7954 | 352 | + | CDS | ND3 | NADH dehydrogenase subunit 3 | 1 |
| NC_026860.1 | 7955 | 8023 | 69 | + | tRNA | trnS(ucu) | tRNA-Ser | 2 |
| NC_026860.1 | 8023 | 9040 | 1018 | + | CDS | ND2 | NADH dehydrogenase subunit 2 | 1 |
| NC_026860.1 | 9017 | 10573 | 1557 | + | CDS | COX1 | cytochrome c oxidase subunit I | 1 |
| NC_026860.1 | 10573 | 10635 | 63 | + | tRNA | trnN(guu) | tRNA-Asn | 1 |
| NC_026860.1 | 10635 | 11322 | 688 | + | CDS | COX2 | cytochrome c oxidase subunit II | 1 |
| NC_026860.1 | 11320 | 11385 | 66 | + | tRNA | trnD(guc) | tRNA-Asp | 1 |
| NC_026860.1 | 11385 | 11544 | 160 | + | CDS | ATP8 | ATP synthase F0 subunit 8 | 1 |
| NC_026860.1 | 11542 | 11604 | 63 | + | tRNA | trnY(gua) | tRNA-Tyr | 1 |
| NC_026860.1 | 11604 | 11668 | 65 | + | tRNA | trnG(ucc) | tRNA-Gly | 1 |
| NC_026860.1 | 11668 | 12448 | 781 | + | CDS | COX3 | cytochrome c oxidase subunit III | 1 |
| NC_026860.1 | 12451 | 12520 | 70 | + | tRNA | trnQ(uug) | tRNA-Gln | 1 |
| NC_026860.1 | 12520 | 13012 | 493 | + | CDS | ND6 | NADH dehydrogenase subunit 6 | 1 |
| NC_026860.1 | 12992 | 14134 | 1143 | + | CDS | CYTB | cytochrome b | 1 |
| NC_026860.1 | 14133 | 14196 | 64 | + | tRNA | trnW(uca) | tRNA-Trp | 1 |
| NC_026860.1 | 14196 | 14883 | 688 | + | CDS | ATP6 | ATP synthase F0 subunit 6 | 1 |
| NC_026860.1 | 14881 | 14945 | 65 | + | tRNA | trnR(ucg) | tRNA-Arg | 1 |