Urechis caupo
NCBI Taxonomy ID: 6431
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Gene Features Summary
summary.1.txt
NC_006379.1
NCBI
| Length(bp) | 15113 |
|---|---|
| Circularity | yes |
| Protein-coding | 13 |
| tRNA | 22 |
| rRNA | 2 |
Gene Features
| Seq_id | Start | End | Length(bp) | Direction | Type | Gene_name | Gene_prodcut | Total_freq_occurred |
|---|---|---|---|---|---|---|---|---|
| NC_006379.1 | 1 | 1534 | 1534 | + | CDS | COX1 | cytochrome c oxidase subunit I | 1 |
| NC_006379.1 | 1539 | 2238 | 700 | + | CDS | COX2 | cytochrome c oxidase subunit II | 1 |
| NC_006379.1 | 2231 | 2297 | 67 | + | tRNA | trnP(ugg) | tRNA-Pro | 1 |
| NC_006379.1 | 2297 | 2360 | 64 | + | tRNA | trnD(guc) | tRNA-Asp | 1 |
| NC_006379.1 | 2360 | 2531 | 172 | + | CDS | ATP8 | ATP synthase F0 subunit 8 | 1 |
| NC_006379.1 | 2532 | 2596 | 65 | + | tRNA | trnT(ugu) | tRNA-Thr | 1 |
| NC_006379.1 | 2596 | 2890 | 295 | + | CDS | ND4L | NADH dehydrogenase subunit 4L | 1 |
| NC_006379.1 | 2883 | 4230 | 1348 | + | CDS | ND4 | NADH dehydrogenase subunit 4 | 1 |
| NC_006379.1 | 4232 | 4298 | 67 | + | tRNA | trnM(cau) | tRNA-Met | 1 |
| NC_006379.1 | 4304 | 4367 | 64 | + | tRNA | trnN(guu) | tRNA-Asn | 1 |
| NC_006379.1 | 4368 | 4431 | 64 | + | tRNA | trnG(ucc) | tRNA-Gly | 1 |
| NC_006379.1 | 4432 | 5437 | 1006 | + | CDS | ND2 | NADH dehydrogenase subunit 2 | 1 |
| NC_006379.1 | 5435 | 5499 | 65 | + | tRNA | trnY(gua) | tRNA-Tyr | 1 |
| NC_006379.1 | 5500 | 5566 | 67 | + | tRNA | trnL(uag) | tRNA-Leu | 2 |
| NC_006379.1 | 5570 | 5634 | 65 | + | tRNA | trnA(ugc) | tRNA-Ala | 1 |
| NC_006379.1 | 5634 | 5701 | 68 | + | tRNA | trnS(uga) | tRNA-Ser | 2 |
| NC_006379.1 | 5705 | 5769 | 65 | + | tRNA | trnL(uaa) | tRNA-Leu | 2 |
| NC_006379.1 | 5770 | 6712 | 943 | + | CDS | ND1 | NADH dehydrogenase subunit 1 | 1 |
| NC_006379.1 | 6707 | 6774 | 68 | + | tRNA | trnI(gau) | tRNA-Ile | 1 |
| NC_006379.1 | 6774 | 6839 | 66 | + | tRNA | trnK(uuu) | tRNA-Lys | 1 |
| NC_006379.1 | 6839 | 7196 | 358 | + | CDS | ND3 | NADH dehydrogenase subunit 3 | 1 |
| NC_006379.1 | 7259 | 8098 | 840 | + | rRNA | s-rRNA | 12S ribosomal RNA | 1 |
| NC_006379.1 | 8079 | 9380 | 1302 | + | rRNA | l-rRNA | 16S ribosomal RNA | 1 |
| NC_006379.1 | 9365 | 9428 | 64 | + | tRNA | trnV(uac) | tRNA-Val | 1 |
| NC_006379.1 | 9428 | 9495 | 68 | + | tRNA | trnS(ucu) | tRNA-Ser | 2 |
| NC_006379.1 | 9538 | 10318 | 781 | + | CDS | COX3 | cytochrome c oxidase subunit III | 1 |
| NC_006379.1 | 10601 | 10669 | 69 | + | tRNA | trnQ(uug) | tRNA-Gln | 1 |
| NC_006379.1 | 10669 | 11137 | 469 | + | CDS | ND6 | NADH dehydrogenase subunit 6 | 1 |
| NC_006379.1 | 11138 | 12269 | 1132 | + | CDS | CYTB | cytochrome b | 1 |
| NC_006379.1 | 12267 | 12330 | 64 | + | tRNA | trnW(uca) | tRNA-Trp | 1 |
| NC_006379.1 | 12330 | 13074 | 745 | + | CDS | ATP6 | ATP synthase F0 subunit 6 | 1 |
| NC_006379.1 | 13075 | 13138 | 64 | + | tRNA | trnR(ucg) | tRNA-Arg | 1 |
| NC_006379.1 | 13138 | 13202 | 65 | + | tRNA | trnH(gug) | tRNA-His | 1 |
| NC_006379.1 | 13202 | 14908 | 1707 | + | CDS | ND5 | NADH dehydrogenase subunit 5 | 1 |
| NC_006379.1 | 14907 | 14974 | 68 | + | tRNA | trnF(gaa) | tRNA-Phe | 1 |
| NC_006379.1 | 14975 | 15040 | 66 | + | tRNA | trnC(gca) | tRNA-Cys | 1 |
| NC_006379.1 | 15042 | 15108 | 67 | + | tRNA | trnE(uuc) | tRNA-Glu | 1 |