Hediste japonica
NCBI Taxonomy ID: 73376
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Gene Features Summary
summary.1.txt
NC_050679.1
NCBI
| Length(bp) | 15783 |
|---|---|
| Circularity | yes |
| Protein-coding | 13 |
| tRNA | 21 |
| rRNA | 2 |
| Missing | tRNA-Arg |
Gene Features
| Seq_id | Start | End | Length(bp) | Direction | Type | Gene_name | Gene_prodcut | Total_freq_occurred |
|---|---|---|---|---|---|---|---|---|
| NC_050679.1 | 1 | 1536 | 1536 | + | CDS | COX1 | cytochrome c oxidase subunit I | 1 |
| NC_050679.1 | 1536 | 1601 | 66 | + | tRNA | trnN(guu) | tRNA-Asn | 1 |
| NC_050679.1 | 1601 | 2291 | 691 | + | CDS | COX2 | cytochrome c oxidase subunit II | 1 |
| NC_050679.1 | 2339 | 2402 | 64 | + | tRNA | trnG(ucc) | tRNA-Gly | 1 |
| NC_050679.1 | 3580 | 3645 | 66 | + | tRNA | trnY(gua) | tRNA-Tyr | 1 |
| NC_050679.1 | 3717 | 3882 | 166 | + | CDS | ATP8 | ATP synthase F0 subunit 8 | 1 |
| NC_050679.1 | 3877 | 3940 | 64 | + | tRNA | trnM(cau) | tRNA-Met | 1 |
| NC_050679.1 | 3940 | 4004 | 65 | + | tRNA | trnD(guc) | tRNA-Asp | 1 |
| NC_050679.1 | 4034 | 4817 | 784 | + | CDS | COX3 | cytochrome c oxidase subunit III | 1 |
| NC_050679.1 | 4812 | 4875 | 64 | + | tRNA | trnQ(uug) | tRNA-Gln | 1 |
| NC_050679.1 | 4884 | 5349 | 466 | + | CDS | ND6 | NADH dehydrogenase subunit 6 | 1 |
| NC_050679.1 | 5341 | 6478 | 1138 | + | CDS | CYTB | cytochrome b | 1 |
| NC_050679.1 | 6476 | 6539 | 64 | + | tRNA | trnW(uca) | tRNA-Trp | 1 |
| NC_050679.1 | 6539 | 7235 | 697 | + | CDS | ATP6 | ATP synthase F0 subunit 6 | 1 |
| NC_050679.1 | 7300 | 7363 | 64 | + | tRNA | trnH(gug) | tRNA-His | 1 |
| NC_050679.1 | 7363 | 9044 | 1682 | + | CDS | ND5 | NADH dehydrogenase subunit 5 | 1 |
| NC_050679.1 | 9044 | 9108 | 65 | + | tRNA | trnF(gaa) | tRNA-Phe | 1 |
| NC_050679.1 | 9116 | 9180 | 65 | + | tRNA | trnE(uuc) | tRNA-Glu | 1 |
| NC_050679.1 | 9178 | 9242 | 65 | + | tRNA | trnP(ugg) | tRNA-Pro | 1 |
| NC_050679.1 | 9244 | 9310 | 67 | + | tRNA | trnT(ugu) | tRNA-Thr | 1 |
| NC_050679.1 | 9310 | 9598 | 289 | + | CDS | ND4L | NADH dehydrogenase subunit 4L | 1 |
| NC_050679.1 | 9591 | 10920 | 1330 | + | CDS | ND4 | NADH dehydrogenase subunit 4 | 1 |
| NC_050679.1 | 10926 | 11739 | 814 | + | rRNA | s-rRNA | 12S ribosomal RNA | 1 |
| NC_050679.1 | 11710 | 13040 | 1331 | + | rRNA | l-rRNA | 16S ribosomal RNA | 1 |
| NC_050679.1 | 11732 | 11797 | 66 | + | tRNA | trnV(uac) | tRNA-Val | 1 |
| NC_050679.1 | 12989 | 13052 | 64 | + | tRNA | trnL(uag) | tRNA-Leu | 2 |
| NC_050679.1 | 13069 | 13128 | 60 | + | tRNA | trnS(uga) | tRNA-Ser | 2 |
| NC_050679.1 | 13134 | 13197 | 64 | + | tRNA | trnA(ugc) | tRNA-Ala | 1 |
| NC_050679.1 | 13197 | 13259 | 63 | + | tRNA | trnL(uaa) | tRNA-Leu | 2 |
| NC_050679.1 | 13259 | 14184 | 926 | + | CDS | ND1 | NADH dehydrogenase subunit 1 | 1 |
| NC_050679.1 | 14184 | 14249 | 66 | + | tRNA | trnI(gau) | tRNA-Ile | 1 |
| NC_050679.1 | 14249 | 14315 | 67 | + | tRNA | trnK(uuu) | tRNA-Lys | 1 |
| NC_050679.1 | 14315 | 14660 | 346 | + | CDS | ND3 | NADH dehydrogenase subunit 3 | 1 |
| NC_050679.1 | 14658 | 14725 | 68 | + | tRNA | trnS(ucu) | tRNA-Ser | 2 |
| NC_050679.1 | 14725 | 15715 | 991 | + | CDS | ND2 | NADH dehydrogenase subunit 2 | 1 |
| NC_050679.1 | 15721 | 15783 | 63 | + | tRNA | trnC(gca) | tRNA-Cys | 1 |