Eisenia andrei

Single-cell atlas for Eisenia andrei with cluster details and marker gene summary.

Dataset summary

Class Clitellata
Order Crassiclitellata
Family Lumbricidae
Species Eisenia andrei
Directory whole
Tissue whole
Stage adult
Clusters 62
Cells 95,020
Type single-cell
Year 2022
Platform Microwell-seq
Study general biology
BioProject PRJNA737471
Journal Nature Genetics
DOI 10.1038/s41588-022-01197-7
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Cluster visualization

Interactive UMAP visualization of the single-cell dataset.

tSNE.jpg cluster visualization
Static cluster visualization: tSNE.jpg

Download Bar

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UMAP coordinates file.
Gene expression matrix.
Marker gene summary.
Static UMAP/tSNE cluster visualization.
RDS single-cell dataset file.
RDS single-cell dataset file.

Marker genes by cluster

Gene p_val_adj
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Source: Markers.csv

Gene expression by cluster

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Functional Annotation

View functional annotation details for the selected marker gene.

Click a gene in the marker table to load expression and functional annotation.